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Table 1 Observed number of CTCF binding sites on 23 chromosomes

From: T-KDE: a method for genome-wide identification of constitutive protein binding sites from multiple ChIP-seq data sets

Bandwidth or bin width (bp)

T-KDE

Binning

Number of declared sites

Number of declared sites

Total

Constitutive

Total

Constitutive

100

142,087

21,812

200,907

2,815

200

133,194

21,884

178,992

11,114

300

128,303

21,834

169,610

14,543

400

124,552

21,750

163,191

16,593

500

121,303

21,690

158,106

17,687

600

118,408

21,606

154,369

18,267

700

115,859

21,523

151,016

18,911

800

113,530

21,464

148,453

19,370

900

111,222

21,375

146,293

19,511

1,000

109,188

21,314

144,005

19,803