|
n
| T | % pol | SNP | Private |
P
|
H
O
|
H
E
|
F
IS
|
Ï€
|
N
e
|
---|
Br | 17 | 24273 | 23.64 | 8755 | 2511 | 0.800 | 0.265 | 0.282 | 0.079 | 0.0014 | 23083 |
Au | 17 | 25019 | 21.68 | 8026 | 1310 | 0.810 | 0.234 | 0.268 | 0.120 | 0.0012 | 19479 |
In | 13 | 25002 | 20.87 | 7757 | 1423 | 0.809 | 0.253 | 0.270 | 0.083 | 0.0012 | 19230 |
Vi | 15 | 22333 | 20.61 | 6877 | 1200 | 0.815 | 0.243 | 0.261 | 0.079 | 0.0011 | 18401 |
All | 62 | 13591 | 70.72 | 18147 | Â | Â | Â | Â | Â | Â | Â |
- n - the number of analyzed individuals from Brazil (Br), Australia (Au), Indonesia (In) and Vietnam (Vi); T - the number of RAD loci; % pol - percentage of polymorphic loci; SNP - total number of SNPs; private - the number of private SNPs; P - average frequency of the more common allele; HO, HE – observed and expected heterozygosity at polymorphic sites; FIS - fixation index across polymorphic sites; π – average nucleotide diversity (calculated across polymorphic and non-variant sites); Ne – lower range effective population size (for μ = 10-8 per site per generation).