From: BisQC: an operational pipeline for multiplexed bisulfite sequencing
Gene | IGF2R | GRB10 | PEG3 | MEST | RB1 | KCNQ1 | GAPDH | ACTB |
---|---|---|---|---|---|---|---|---|
(CpG island location, hg19) | (chr6:160426265ā160427502) | (chr7:50849753ā50850871) | (chr19:57351284ā57351995) | (chr7:130130740ā130133111) | (chr13:48892636ā48893857) | (chr11:2720411ā2722087) | (chr12:6643262ā6644607) | (chr7:5569063ā5570594) |
B02 | 46.4% | 24.8% | 38.0% | 34.4% | 60.9% | 39.2% | 1.4% | 0.8% |
D07 | 50.0% | 28.5% | 44.7% | 33.9% | 61.2% | 36.9% | 0.7% | 0.4% |
E08 | 57.4% | 27.2% | 34.1% | 37.2% | 56.4% | 36.4% | 1.8% | 1.7% |
G12 | 49.4% | 24.5% | 30.1% | 34.3% | 60.1% | 36.9% | 1.3% | 1.0% |
Sperm [29] | 69.8% | 45.2% | 42.0% | 49.9% | 57.7% | 50.4% | - | - |