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Table 2 A list of selected genes belong to differentially enriched gene ontology (GO) biological process

From: Nucleosome positioning and histone modifications define relationships between regulatory elements and nearby gene expression in breast epithelial cells

GO process

Genes

Proteolysis

ADAMTS3, CPA4, CTSB, CTSC, HTRA1, KLK10, KLK5, KLK6, KLK7, KLK8, MMP2, PREP, PRSS12, PRSS8, PYCARD, ST14, ZFP90

Epidermis development

ATP2A2, COL17A1, GJB5, KLK5, KLK7, KRT5, LAMC2, PTHLH, S100A7, SPRR1A, SPRR1B

Cell adhesion

ATP2A2, BOC, CDH3, CELSR2, CLDN1, CLSTN1, CTNND1, DDR1, DSC2, DSC3, DST, F11R, FBLIM1, FLRT2, IGFBP7, ITGB8, LAMC2, MTSS1, NID1, NRP2, NTM, PTK7, PTPRF, SDK2, SIRPA, SPOCK1, SSPN, SSX2IP, TRIP6, ZYX

Chemotaxis

CMTM6, CXCL14, IL8, PTAFR, S100A8, S100A9

Wound healing

CDH3, IL1A, IL1B, SDC1, SERPINB2, TPM1

Mitosis

ANAPC1, BIRC5, BUB1B, CCNF, CEP55, KIF2C, NCAPG2, SPC24, TPX2, TUBB, TUBB2A, UBE2C

Cell cycle

ANAPC1, BIRC5, BUB1B, CCNF, CDKN1B, CDKN3, CEP55, DDX11, DUSP1, GSG2, ING1, ITGAE, KIF2C, LLGL2, NCAPG2, PARD3B, PIN1, RPS6KB1, SPC24, STK11, TPX2, UBE2C

DNA replication

MCM10, POLD1, POLG2, RRM2, TK1

Chromatin modification

ASF1B, ASXL1, EZH1, GSG2, H2AFY, MLL, NSD1, TAF5, WHSC1

Cell division

ANAPC1, BIRC5, BUB1B, CCNF, CEP55, KIF2C, LLGL2, NCAPG2, PARD3B, SPC24, TPX2, UBE2C