Table 5 Alternative splicing events in response to salt stress in P. euphratica and P. pruinosa
From: Transcriptome differences between two sister desert poplar species under salt stress
Type of event | PeuC | PeuS | PprC | PprS | Total |
|---|---|---|---|---|---|
Skipped exon | 13,323 | 12,130 | 11,655 | 10,749 | 20,334 |
Retained intron | 2867 | 2195 | 2182 | 1776 | 4795 |
Alternative 5’ splice site (A5SS) | 274 | 294 | 282 | 269 | 529 |
Alternative 3’ splice site (A3SS) | 250 | 232 | 251 | 230 | 430 |
Alternative first exon (AFE) | 162 | 129 | 148 | 142 | 222 |
Alternative last exon (ALE) | 157 | 145 | 154 | 144 | 250 |
Total AS events | 17,033 | 15,125 | 14,672 | 13,310 | 26,560 |
Loci having AS events | 6662 | 5850 | 6192 | 5765 | 8380 |