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Figure 3 | BMC Genomics

Figure 3

From: DNA-encoded nucleosome occupancy is associated with transcription levels in the human malaria parasite Plasmodium falciparum

Figure 3

Association between nucleosome occupancy and transcription level at the trophozoite stage. A. The average number of nucleosomes per kilobase in the 500 base pair upstream of the translation start site (promoter region) for each transcription cluster of 500 genes. B. The average score of nucleosomes located in the promoter region for each transcription cluster. C. Sequence read coverage around the transcription start site for the subset of genes with annotated transcription start sites in each transcription cluster. D. The average number of nucleosomes per kilobase inside coding regions for each transcription cluster. E. The average score of all nucleosomes located inside coding regions for each transcription cluster. Correlation coefficients reported were obtained using the Spearman’s rank test. F-J: Same as panels A-E for an independent trophozoite-stage nucleosome occupancy data set generated by Bartfai et al. [20].

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