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Table 1 Comparison of CAZyme classes between plant-adherent rumen microbial metasecretome and metagenome datasets

From: Metasecretome-selective phage display approach for mining the functional potential of a rumen microbial community

CAZyme class

Count MS

Distribution MS

Count MG

Distribution MG

Carbohydrate-binding modules

1038

8.3%

cpo1656

7.6%

Carbohydrate esterases

1499

11.9%

2235

10.2%

Glycoside hydrolases

7639

60.8%

11606

53.2%

Glycosyl transferases

793

6.3%

5126

23.5%

Polysaccharide lyases

382

3.0%

524

2.4%

Auxiliary activities

67

0.5%

451

2.1%

Cellulosome components*

1147 (577)

9.2% (7.2%)

225 (207)

1.0% (0.9%)

SLH

46 (34)

0.37% (0.43%)

77 (72)

0.35% (0.33%)

cohesins

52 (44)

0.41% (0.55%)

27 (27)

0.12% (0.12%)

dockerins

1049 (499)

8.35% (6.25%)

121 (108)

0.55% (0.50%)

Total*

12565 (7978)

100.0%

21823 (21607)

100.0%

  1. Abbreviations: MS, metasecretome dataset; MG, metagenome dataset. *Numbers in parentheses refer to the CAZYme hits clustered at 100% sequence identity to remove duplicity and were used in analysis of cellulosome hit frequencies.