Table 1 Summary statistics of sequencing runs and read processing
From: Transcriptomic changes during regeneration of the central nervous system in an echinoderm
| Â | Total number | Total number | Mean read | Modal (most frequent) | Read length |
|---|---|---|---|---|---|
| Â | of reads | of bases | length | read length | range |
Total Raw 454 reads | 2,428,740 | 1,444,989,971 | 595 | 546 | 49 – 1,201 |
Total Cleaned 454 reads | 1,620,029 | 864,494,207 | 534 | 523 | 60 – 994 |
Raw Illimina Norm #1 | 41,062,198 | 3,079,664,850 | 75 | 75 | 75 |
Raw Illimina Norm #2 | 41,396,915 | 3,104,768,625 | 75 | 75 | 75 |
Raw Illimina d2 #1 | 40,461,887 | 3,034,641,525 | 75 | 75 | 75 |
Raw Illimina d2 #2 | 42,713,246 | 3,203,493,450 | 75 | 75 | 75 |
Raw Illimina d12 #1 | 42,485,405 | 3,186,405,375 | 75 | 75 | 75 |
Raw Illimina d12 #2 | 42,718,652 | 3,203,898,900 | 75 | 75 | 75 |
Raw Illimina d20 #1 | 38,333,067 | 2,874,980,025 | 75 | 75 | 75 |
Raw Illimina d20 #2 | 42,759,841 | 3,206,988,075 | 75 | 75 | 75 |
Total Raw Illumina | 331,931,211 | 24,894,840,825 | 75 | 75 | 75 |
Cleaned Illimina Norm #1 | 30,668,029 | 1,760,422,119 | 57 | 61 | 32 – 61 |
Cleaned Illimina Norm #2 | 29,685,397 | 1,717,566,430 | 58 | 61 | 32 – 61 |
Cleaned Illimina d2 #1 | 28,982,010 | 1,648,498,857 | 57 | 61 | 32 – 61 |
Cleaned Illimina d2 #2 | 30,382,668 | 1,721,162,425 | 57 | 61 | 32 – 61 |
Cleaned Illimina d12 #1 | 33,755,449 | 1,947,272,365 | 58 | 61 | 32 – 61 |
Cleaned Illimina d12 #2 | 33,893,212 | 1,956,101,048 | 58 | 61 | 32 – 61 |
Cleaned Illimina d20 #1 | 29,670,665 | 1,697,625,162 | 57 | 61 | 32 – 61 |
Cleaned Illimina d20 #2 | 29,956,377 | 1,693,992,519 | 57 | 61 | 32 – 61 |
Total Cleaned Illumina | 246,993,807 | 14,142,640,925 | 57 | 61 | 32–61 |