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Table 1 Tissues and conditions used to produce the RNA libraries

From: A comprehensive assessment of the transcriptome of cork oak (Quercus suber) through EST sequencing

cDNAlibrary

Library description

L-1

Phloem (adult trees)

L-2

Xylem (adult trees)

L-3

Abiotic stress: control (leaves)

L-4

Abiotic stress: cold (leaves)

L-5

Abiotic stress: heat (leaves)

L-6

Seed germination

L-7

Female flowers

L-8

Male flowers

L-9

Embryos from fruits at 4 developmental stages

L-10

Whole fruits at 7 developmental stages

L-11

Biotic Stress: roots (germinated acorns) infected by Phytophthora cinnamomi.

L-12

Biotic Stress: roots (thin white roots from 18-month-old plants) infected by Phytophthora cinnamomi.

L-13

Mycorrhizal symbiosis (roots).

L-14

Annual stems from cork producing Quercus suber x cerris hybrid trees

L-15

Annual stems from cork non-producing Quercus suber x cerris hybrid trees

L-16

Bud sprouting (bud phases 1 and 2).

L-17

Bud sprouting (bud phases 3 and 4).

L-18

Abiotic Stress: drought, salt and oxidative stresses (roots and shoots)

L-19

Leaves (from 8 locations for polymorphism detection)

L-20

High quality cork

L-21

Low quality cork

  1. All libraries were normalized.