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Table 3 DA/O and DA/K differentiating regions

From: Identification of candidate risk gene variations by whole-genome sequence analysis of four rat strains commonly used in inflammation research

Chr.

Start

End

DA/O similar to:

DA/K similar to:

SNVs in region

Genes in region

Genes with NS SNVs

Polymorphic genes

1

225.91

229.22

ACI

F344, BUF

3871

21

2

Kank1, ENSRNOG00000023843.

2

201.5

207.21

LE

ACI

9084

74

14

Dennd2d, Prok1, Slc16a4, Gstm7, Clcc1, Prmt6.

 

218.22

219.01

ACI, E3

F344, BN

1482

6

3

Arhgap29, Abca4, Dnttip2.

3

34.7

52.32

ACI

* (F344)

24496

80

20

Slc39a11, Galnt5, Upp2, L:y75, Dpp4, Grb14 (Stop).

 

73.21

78.08

ACI, F344, BUF

* (WKY)

6287

100

33

C1qtnf4, Mybpc3, Ol726 (Stop), Acp2, Pacsin, Dgkz.

     

Olfactory:

56

26

 
     

Other:

44

7

 

5

7.1

8.06

*

*

1123

1

1

Depdc2 (Prex2)

7

45.76

48.5

SHR, F344, WKY

ACI

4352

13

3

Ptprq, ENSRNOG00000030316 (Otogl).

13

33.3

35.6

ACI, SHR

PVG, E3, BUF

5250

7

2

ENSRNOG00000030901, Dpp10.

  1. (* unclear).