From: Transcriptome profiling of granulosa cells from bovine ovarian follicles during atresia
Gene symbol | Fold change | Gene symbol | Fold change | Gene symbol | Fold change |
---|---|---|---|---|---|
Cell Cycle and DNA replication | |||||
CDKN1C | 40.2 | RGCC | 5.1 | IFITM3 | 3.3 |
MICAL1 | 8.9 | TOP1 | 5.1 | DYNLT3 | 3.1 |
CDC37L1 | 5.9 | RAD52 | 3.5 | BAZ1A | 3.0 |
TOPORS | 5.7 | KLC1 | 3.4 | Â | Â |
Cell Death | |||||
TNFRSF12A | 10.4 | *PHLDA1 | 4.7 | TNFRSF25 | 3.4 |
CFLAR | 6.0 | PDCD4 | 3.9 | TNFRSF1A | 3.2 |
TNFRSF6B | 5.9 | FAIM | 3.8 | PDCD10 | 3.1 |
Cell Morphology | |||||
MAP1LC3C | 16.7 | APBB1IP | 4.6 | SNTB2 | 4.0 |
CAPG | 11.1 | MAP2 | 4.5 | MTMR3 | 3.8 |
TAGLN | 10.8 | CNN1 | 4.4 | LMNA | 3.5 |
DBNDD2 | 9.2 | AIF1L | 4.4 | ABLIM1 | 3.5 |
NDRG1 | 9.0 | VCL | 4.3 | FHOD3 | 3.4 |
SYNE1 | 7.6 | WASL | 4.3 | MARCKSL1 | 3.2 |
CLDN5 | 6.3 | CDH1 | 4.3 | MAP9 | 3.2 |
SVIL | 6.1 | ACTA2 | 4.3 | MICAL2 | 3.1 |
MICALL2 | 6.1 | TAGLN2 | 4.3 | ELMO1 | 3.1 |
FILIP1L | 5.6 | FSCN1 | 4.2 | ELMO2 | 3.1 |
ARPC1B | 5.5 | FNBP1L | 4.1 | *ARF5 | 3.1 |
FERMT2 | 5.4 | TLN1 | 4.1 | TPGS1 | 3.0 |
GSN | 5.3 | ACTN1 | 4.1 | B9D2 | 3.0 |
TUBB6 | 5.1 | DSTN | 4.0 | FBLIM1 | 3.0 |
CAV1 | 4.6 | RILPL2 | 4.0 | Â | Â |
Cytokines, Hormones and Receptors | |||||
PDGFRA | 26.5 | IGF2R | 6.2 | CD302 | 3.7 |
SCG2 | 24.4 | ELTD1 | 6.1 | JAG1 | 3.6 |
CTGF | 23.4 | TSPO | 5.7 | IL10RA | 3.6 |
DKK3 | 17.4 | IGFBP6 | 5.1 | PTPRK | 3.6 |
XCL1 | 16.7 | IGF2 | 5.0 | PLXND1 | 3.6 |
SPP1 | 14.1 | TGFBR2 | 5.0 | CMTM3 | 3.5 |
OLR1 | 11.7 | MIA3 | 4.6 | IL17RA | 3.5 |
MDK | 9.9 | IFI30 | 4.5 | NR4A2 | 3.5 |
IL18 | 8.9 | IGFBP5 | 4.3 | ANGPTL4 | 3.4 |
PRICKLE1 | 8.2 | EFNA4 | 4.2 | EFNA5 | 3.3 |
BAMBI | 7.6 | NR2F1 | 4.1 | GPRC5B | 3.3 |
NDP | 7.6 | ADM | 3.9 | GPR155 | 3.3 |
GNG2 | 7.3 | PLXNB2 | 3.8 | ACVR1 | 3.1 |
PLAUR | 6.7 | *PVRL2 | 3.8 | SCG5 | 3.1 |
BMP2 | 6.6 | Â | Â | Â | Â |
Directional Cell Growth | |||||
SLITRK2 | 4.3 | ROCK2 | 3.8 | ROCK1 | 3.3 |
Extracellular Matrix and Synthesis | |||||
*SPOCK2 | 23.8 | TNFAIP6 | 7.1 | COL18A1 | 4.0 |
*NID2 | 18.5 | LOXL4 | 6.5 | *FN1 | 3.9 |
*LEPREL1 | 12.8 | LUM | 6.1 | FBN1 | 3.8 |
LAMB1 | 12.0 | COL3A1 | 5.5 | COL4A5 | 3.5 |
DCN | 11.1 | COL1A2 | 5.3 | SPON2 | 3.5 |
MGP | 9.5 | PCOLCE2 | 4.6 | SDC4 | 3.4 |
SDC2 | 9.0 | COL4A1 | 4.5 | COL12A1 | 3.4 |
FBLN2 | 8.7 | AGRN | 4.1 | COL6A1 | 3.2 |
COL5A2 | 8.3 | Â | Â | Â | Â |
Intercellular and Cell to Matrix Adhesion | |||||
KRT18 | 62.4 | CLDN1 | 10.2 | MAGI3 | 4.6 |
KRT8 | 53.2 | CD9 | 7.1 | AMIGO2 | 4.5 |
PTX3 | 24.1 | PCDH7 | 7.0 | ANTXR2 | 3.7 |
THBS2 | 23.9 | FLNB | 6.6 | SPARC | 3.6 |
LGALS3 | 22.9 | MAGI1 | 6.0 | CADM1 | 3.3 |
*CD24 | 17.1 | VMP1 | 5.3 | JAM3 | 3.2 |
CYR61 | 14.1 | CLDN11 | 4.9 | CCDC80 | 3.0 |
CALD1 | 11.6 | Â | Â | Â | Â |
Ion Transport | |||||
KCNMB4 | 5.7 | CACNB3 | 4.0 | KCTD10 | 3.8 |
GPM6A | 4.8 | CLCA4 | 3.9 | SEPP1 | 3.7 |
CLIC4 | 4.5 | SCN5A | 3.9 | KCNJ2 | 3.7 |
Protein Trafficking | |||||
ANXA1 | 10.9 | SCG3 | 4.0 | PLEKHB2 | 3.6 |
GABARAPL1 | 6.2 | CHMP5 | 3.7 | SCAP | 3.4 |
GIT2 | 4.4 | MVP | 3.7 | PLEKHG2 | 3.3 |
SH3RF1 | 4.0 | Â | Â | Â | Â |
Proteolysis or Inhibition | |||||
TIMP1 | 68.9 | CAST | 6.7 | CTSZ | 3.5 |
PLAT | 26.5 | ADAMTS1 | 6.1 | FBXO32 | 3.3 |
SERPINE1 | 19.3 | C1S | 5.9 | TIMP2 | 3.3 |
PRSS23 | 10.9 | CTSH | 4.7 | CTSK | 3.2 |
CSTB | 9.3 | MMP11 | 4.4 | CTSB | 3.2 |
RELN | 7.7 | CTSS | 4.4 | KLHL36 | 3.2 |
MMP23B | 7.7 | CFD | 3.8 | SERPINB2 | 3.1 |
SERPINB8 | 7.4 | PSMB1 | 3.5 | LYZ | 3.0 |
RNA Processing | |||||
PRPF38B | 7.1 | RBM25 | 3.9 | SNRNP200 | 3.2 |
RBMS2 | 6.3 | DDX5 | 3.7 | HNRNPH3 | 3.2 |
RBM24 | 4.6 | SYNCRIP | 3.6 | CPEB4 | 3.2 |
RBM17 | 4.5 | DDX42 | 3.6 | EBNA1BP2 | 3.1 |
TDRD7 | 4.3 | INTS7 | 3.3 | GEMIN8 | 3.1 |
REXO2 | 4.0 | CWC22 | 3.2 | Â | Â |
Transcription Regulation | |||||
ANKRD1 | 48.9 | TAX1BP3 | 4.8 | LEF1 | 3.4 |
FOSL2 | 11.7 | *MLL3 | 4.7 | TGIF1 | 3.4 |
EGR1 | 11.3 | MTPN | 4.6 | MPHOSPH8 | 3.4 |
ATF3 | 9.7 | EPAS1 | 4.6 | MORF4L2 | 3.3 |
BCL6 | 8.6 | FOXP1 | 4.5 | MAFK | 3.3 |
ATRX | 8.4 | ING4 | 4.4 | CSRNP1 | 3.3 |
ID1 | 7.4 | GTF2F2 | 4.4 | LARP7 | 3.3 |
USF1 | 6.8 | SMAD3 | 4.3 | GTF2E2 | 3.3 |
KLF6 | 6.5 | STAT3 | 4.3 | GTF2H4 | 3.3 |
RBFOX2 | 6.5 | SERTAD1 | 4.3 | BASP1 | 3.3 |
JUN | 6.4 | HHEX | 4.2 | LEO1 | 3.3 |
CEBPD | 6.0 | ZNF398 | 4.2 | TCF3 | 3.3 |
ID3 | 5.8 | HMBOX1 | 4.0 | ZMIZ2 | 3.2 |
*TCF7L2 | 5.8 | PDLIM1 | 3.9 | NFKBIA | 3.2 |
HDAC7 | 5.8 | ZFP36L1 | 3.9 | ZC3H8 | 3.2 |
NMI | 5.7 | JUNB | 3.9 | OSTF1 | 3.2 |
SNAI2 | 5.7 | E4F1 | 3.9 | CIR1 | 3.2 |
ZNF292 | 5.7 | ZNF281 | 3.8 | ZNHIT3 | 3.1 |
LITAF | 5.6 | FOS | 3.7 | GPS2 | 3.1 |
CITED2 | 5.6 | FHL2 | 3.7 | CSDC2 | 3.1 |
CTR9 | 5.5 | CYLD | 3.7 | KHDRBS1 | 3.0 |
*CEBPD | 5.4 | TRANK1 | 3.6 | ILF3 | 3.0 |
KANK2 | 5.1 | FOXO1 | 3.6 | ANKRD10 | 3.0 |
NFIL3 | 5.0 | *CPEB2 | 3.6 | Â | Â |
JARID2 | 4.9 | SCAND1 | 3.5 | Â | Â |
MXI1 | 4.9 | HDAC5 | 3.5 | Â | Â |
Translation Regulation | |||||
MRPS28 | 3.6 | EIF4G3 | 3.2 | EIF2AK4 | 3.2 |
EIF2AK4 | 3.5 | Â | Â | Â | Â |
Transport | |||||
APOD | 37.5 | SLC25A29 | 4.2 | RBP1 | 3.4 |
STAR | 22.5 | STAU1 | 4.1 | TCN2 | 3.4 |
SLC17A5 | 9.0 | VPS13B | 4.1 | SLC25A17 | 3.4 |
FABP5 | 8.9 | STEAP1 | 4.0 | CYTH3 | 3.4 |
A2M | 8.1 | RABEP1 | 3.9 | SYT11 | 3.2 |
NNAT | 7.8 | *ABCB1 | 3.8 | FABP4 | 3.1 |
SLC40A1 | 7.2 | CRABP2 | 3.7 | AP1S2 | 3.1 |
VAT1 | 6.8 | STARD3NL | 3.7 | NPC2 | 3.0 |
SLC39A8 | 5.2 | ANKH | 3.6 | SNX9 | 3.0 |
Other Enzymes | |||||
*VNN1 | 15.1 | PNMT | 4.1 | RAB31 | 3.2 |
*PDK4 | 9.7 | HSP90AA1 | 4.0 | PTPRN2 | 3.2 |
GFPT2 | 7.8 | RAP2C | 4.0 | RIOK2 | 3.2 |
QSOX1 | 5.9 | SETD7 | 4.0 | RNF20 | 3.2 |
DDAH2 | 5.5 | CHST2 | 4.0 | LHFPL2 | 3.2 |
GLRX | 5.4 | SMS | 3.8 | PTPN21 | 3.2 |
PLSCR4 | 5.4 | NT5E | 3.8 | RAB7A | 3.1 |
ENPP5 | 4.9 | MARCKS | 3.7 | DDAH1 | 3.1 |
PYGL | 4.9 | GDPD1 | 3.6 | PPIE | 3.1 |
CA2 | 4.8 | DUSP7 | 3.6 | ARF5 | 3.1 |
RPIA | 4.7 | EGLN1 | 3.5 | RBKS | 3.1 |
PELI1 | 4.7 | ZNRF1 | 3.4 | UST | 3.1 |
MYCBP2 | 4.6 | NAGK | 3.4 | ENO2 | 3.1 |
CPT1A | 4.5 | MGST2 | 3.4 | RNF8 | 3.1 |
GEM | 4.4 | B4GALT5 | 3.4 | PLCL2 | 3.0 |
PIGT | 4.3 | RAB22A | 3.3 | DPH5 | 3.0 |
DUSP1 | 4.3 | ALDH1A1 | 3.3 | IP6K2 | 3.0 |
PXDN | 4.2 | Â | Â | Â | Â |
Other Signalling | |||||
*RND3 | 35.7 | EFHD2 | 5.8 | SHISA2 | 3.9 |
*DCLK1 | 19.5 | JAK1 | 5.7 | RALA | 3.9 |
GAL | 10.6 | VAV2 | 5.6 | CSNK2A1 | 3.7 |
POSTN | 9.9 | INSIG2 | 5.4 | BMPER | 3.7 |
ARHGEF11 | 9.9 | WDR44 | 5.0 | ARHGAP32 | 3.5 |
TP53INP1 | 8.9 | STK17A | 5.0 | S100A11 | 3.3 |
LMTK2 | 8.1 | PTPN5 | 4.6 | UACA | 3.2 |
SH3BP5 | 7.5 | WHSC1L1 | 4.5 | ERBB2 | 3.2 |
GIMAP8 | 7.5 | IRAK1BP1 | 4.4 | FYN | 3.2 |
SH3KBP1 | 7.4 | CFH | 4.4 | CORO1A | 3.2 |
ARHGEF3 | 7.1 | IFITM1 | 4.3 | BCAR1 | 3.1 |
RSPO3 | 7.1 | PIK3CA | 4.3 | DOCK5 | 3.1 |
CD200 | 7.0 | DAB2 | 4.3 | PIK3CD | 3.1 |
PLIN2 | 6.6 | CSNK1G2 | 4.2 | STK38L | 3.1 |
PKIB | 6.5 | MERTK | 4.1 | MAP2K3 | 3.1 |
FBXO33 | 6.2 | RASA2 | 4.1 | TYRO3 | 3.1 |
CD55 | 6.2 | PIM1 | 4.0 | CARD10 | 3.1 |
ERRFI1 | 6.1 | Â | Â | Â | Â |
CD99 | 6.0 | Â | Â | Â | Â |
DAPP1 | 5.8 | Â | Â | Â | Â |
Other | |||||
C8orf4 | 37.2 | RCN2 | 4.4 | CBLB | 3.6 |
SATL1 | 15.2 | KIAA1598 | 4.4 | ASCC2 | 3.5 |
WDFY4 | 11.1 | FAM126B | 4.4 | FAM32A | 3.5 |
PLXDC2 | 9.1 | ZNF317 | 4.2 | OCIAD2 | 3.5 |
LUC7L3 | 8.9 | C1orf35 | 4.2 | SAFB2 | 3.5 |
ZNF462 | 7.5 | RASAL2 | 4.2 | ALKBH4 | 3.4 |
NTN4 | 7.3 | AKAP8L | 4.1 | TSC22D3 | 3.4 |
KIAA0408 | 7.2 | DENND3 | 4.1 | IRGQ | 3.4 |
RSRC2 | 7.1 | C1QTNF6 | 4.1 | AUTS2 | 3.4 |
C10orf10 | 7.0 | CCDC85B | 4.1 | GATSL2 | 3.4 |
PHF3 | 6.4 | ARHGEF2 | 4.0 | COMMD4 | 3.4 |
SDE2 | 6.3 | MAP1B | 4.0 | MLLT11 | 3.3 |
BTBD3 | 6.1 | C3orf19 | 4.0 | ZFYVE1 | 3.3 |
TMEM14A | 5.9 | CUL9 | 4.0 | PPFIBP1 | 3.3 |
ODF2L | 5.8 | MAP7D1 | 3.9 | FAM129B | 3.3 |
MXRA8 | 5.8 | MTA3 | 3.9 | FLRT2 | 3.3 |
GLIPR2 | 5.6 | LIMCH1 | 3.9 | PRRC2C | 3.2 |
NDRG4 | 5.6 | KLHL24 | 3.9 | GPN3 | 3.2 |
TMEM176A | 5.4 | CXorf26 | 3.9 | MESDC1 | 3.2 |
MXRA5 | 5.3 | SHF | 3.9 | ARMCX3 | 3.2 |
CRYAB | 5.1 | YPEL5 | 3.9 | SNN | 3.2 |
C7orf41 | 4.9 | PQLC3 | 3.9 | KIAA0922 | 3.2 |
ZNF608 | 4.9 | TMTC2 | 3.9 | TCP11L2 | 3.2 |
KLHL28 | 4.9 | HECA | 3.8 | ANKRD11 | 3.2 |
PLEKHO1 | 4.8 | C9orf3 | 3.8 | C1orf212 | 3.1 |
TACC2 | 4.8 | LRCH1 | 3.8 | TMEM176B | 3.1 |
GOLPH3L | 4.8 | DPH3 | 3.7 | SYAP1 | 3.1 |
ERRFI1 | 4.7 | CD83 | 3.7 | METRNL | 3.1 |
SRP14 | 4.7 | CTTNBP2NL | 3.7 | FAM160A2 | 3.1 |
ZDHHC23 | 4.7 | TES | 3.7 | MEF2BNB | 3.1 |
EML1 | 4.7 | GLTSCR2 | 3.7 | C5orf30 | 3.1 |
ANXA2 | 4.7 | CLU | 3.6 | ATG14 | 3.1 |
ZNF521 | 4.6 | LHFP | 3.6 | BOD1L1 | 3.1 |
PDLIM4 | 4.6 | PKIG | 3.6 | DEFB4A | 3.0 |
KIAA0232 | 4.4 | LSG1 | 3.6 | C17orf101 | 3.0 |
C12orf75 | 4.4 | Â | Â | Â | Â |