RNA sequencing on Solanum lycopersicum trichomes identifies transcription factors that activate terpene synthase promoters

Table 3 List of selected enzymes involved in the jasmonic acid biosynthesis and signaling

Abbreviation	Contig Nr	SGN Nr	Annotation	Transcript length (bases)	Expression values JA^*	Expression values C^*	Fold JA induction
LOXA^a	6402	SGN-U592535	Lipoxygenase A	2837	35.2	1.6	22
AOC^a	24817	SGN-U562649	Allene oxide cyclase	1645	1898.8	417.6	4.5
JAZ1^b	6863	SGN-U579837	Jasmonate ZIM-domain 1	1156	12.2	0.7	17.4
JAZ3^c	20751	SGN-U564446	Jasmonate ZIM-domain 3	986	18.87	2.3	8.2
COI1^a	24353	SGN-U568988	Coronatine-insensitive 1	2260	11	8.5	1.29

^a[38]: LOXA (U09026), AOC (AW624058), COI1 (NM_001247535), ^b[39]: JAZ1 (EF591123), ^c[40]: JAZ3 (EU194561).
*Expression values are in RPKM (reads per kilobase of transcript per million mapped reads).

ISSN: 1471-2164