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Table 2 Number of transcripts identified as always up- or down-regulated in a specific polyp

From: Differential gene expression between functionally specialized polyps of the colonial hydrozoan Hydractinia symbiolongicarpus (Phylum Cnidaria)

 

padj < .05

 

DESeq

edgeR

Both

 

Up

Down

Up

Down

Up

Down

Gastrozooid

1,067

40

1,934

148

955

31

Gonozooid

3,505

3,405

11,304

1,851

3,491

1,562

Dactylozooid

444

29

999

180

332

20

  1. Transcripts that have support as polyp-specific (must be significant in only two of the three pairwise comparisons) by both DESeq and edgeR are what we refer to as polyp-specific in the text.
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BMC Genomics

ISSN: 1471-2164

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