Table 5 RIF prediction for regulatory factors in the whole dataset of DE genes
Probe set | Gene symbol | Gene | RIF1 z- score§ | RIF2 z- scoreλ |
|---|---|---|---|---|
Ssc.10025.3.S1_at | CEBPD | CCAAT/enhancer binding protein (C/EBP). delta | -3.152 | -0.017 |
Ssc.1012.1.S1_at | ZNF277 | zinc finger protein 277 | -1.251 | 2.751 |
Ssc.10128.1.A1_at | SIX4 | SIX homeobox 4 | -2.986 | 3.127 |
Ssc.13567.1.A1_at | ZHX2 | zinc fingers and homeoboxes 2 | -0.921 | 3.454 |
Ssc.14573.1.S1_at | EYA2 | Eyes absent homolog 2 | -2.907 | 3.048 |
Ssc.16976.1.S1_at | SREBF2 | Sterol regulatory element binding transcription factor 2 | -0.970 | 2.533 |
Ssc.19163.1.S1_at | MXI1 | MAX interactor 1. dimerization protein | -1.860 | 3.443 |
Ssc.19313.1.A1_at | MAX | MYC associated factor X | -3.270 | -1.671 |
Ssc.19537.1.S1_at | IRF2 | Interferon regulatory factor 2 | -2.701 | -0.615 |
Ssc.2001.1.A1_at | LHX6 | LIM homeobox 6 | -1.383 | -2.847 |
Ssc.21096.1.S1_at | PAX2 | Paired box 2 | -0.895 | 2.378 |
Ssc.22470.1.S1_at | PER3 | Period circadian clock 3 | -2.258 | 0.824 |
Ssc.23498.1.S1_s_at | MSTN | Myostatin | -1.930 | 2.582 |
Ssc.24606.1.A1_a_at | PPARGC1B | Peroxisome proliferator-activated receptor gamma coactivator 1 beta | -2.896 | 0.167 |
Ssc.26039.1.S1_at | RORA | RAR-related orphan receptor A | -3.597 | 1.736 |
Ssc.2719.1.A1_at | MTA3 | Metastasis associated 1 family, member 3 | -1.805 | -2.555 |
Ssc.27410.1.S1_at | MYCN | v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog | -2.823 | -0.783 |
Ssc.27576.1.S1_at | MN1 | Meningioma (disrupted in balanced translocation) 1 | -2.263 | -0.086 |
Ssc.27622.1.S1_at | KLF11 | Kruppel-like factor 11 | -3.789 | 2.701 |
Ssc.27964.2.S1_at | GATA3 | GATA binding protein 3 | 0.063 | -2.061 |
Ssc.29855.1.A1_at | CDCA7 | Cell division cycle associated 7 | -2.346 | 0.220 |
Ssc.30288.1.A1_at | GRHL3 | Grainyhead-like 3 (Drosophila) | 0.489 | -2.038 |
Ssc.30799.1.A1_at | DACH1 | Dachshund family transcription factor 1 | 0.772 | -2.329 |
Ssc.3355.1.S1_at | HDAC1 | Histone deacetylase 1 | 0.747 | -1.971 |
Ssc.4212.1.A1_at | ELK3 | ELK3, ETS-domain protein (SRF accessory protein 2) | -2.349 | -1.032 |
Ssc.6697.1.S1_at | SOX4 | SRY (sex determining region Y)-box 4 | -3.143 | -0.718 |
Ssc.8529.1.A1_at | ZFP36L1 | ZFP36 ring finger protein-like 1 | -3.282 | 1.299 |
Ssc.9136.1.S1_at | CCRN4L | CCR4 carbon catabolite repression 4-like (S. cerevisiae) | -1.056 | -2.354 |
Ssc.9298.1.A1_at | IRX3 | Iroquois homeobox 3 | -2.538 | -0.692 |