IDa | Strandb | Startc | Endc | Sized | Adjacent genese | Orientationf | Rfam (E-value)g | RI terminatorh | Northerni | Mutationj | 5’ RACEk | Δ hfq/Ea1189 6 hr (%)l | Δ hfq/Ea1189 12 hr (%)m |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
spf (spot42) | + | 52654 | 52816 | 163 | polA/engB | > > < | RF00021 (3.2E-25) | Yes | NT | Yes |  | 12.5 | 7.2 |
hrs1 | + | 130070 | 130143 | 74 | cpxP/fief | > > > | N/A | Yes | Yes | No | Â | 21.2 | 13.9 |
hrs2 | + | 245012 | 245077 | 66 | metE/ysgA | > > < | N/A | Yes | NT | No |  | 8.5 | 4.5 |
hrs3 | + | 834512 | 834619 | 108 | EAM0472/EAM0473 | < > < | N/A | Yes | NT | No | Â | 33.3 | 0.0 |
micM (sroB) | + | 1149210 | 1149296 | 87 | EAM1042/EAM1043 | < > < | RF00368 (7.5E-10) | Yes | NT | Yes | Â | 10.0 | 0.0 |
hrs4 | - | 1252343 | 1252249 | 95 | mtr/fur | > < < |  | Yes | NT | No |  | 86.9 | 76.4 |
hrs5 | - | 1408551 | 1408436 | 116 | EAM1295/EAM1296 | < < < | RF00110 (1.2E-10) | Yes | Yes | Yes | 1408551 | 15.9 | 10.8 |
rprA | - | 1771945 | 1771835 | 111 | ppsA/EAM1647 | > < < | RF00034 (1.9E-12) | Yes | Yes | Yes |  | 2.5 | 5.5 |
hrs6 (rmaA) | + | 1783452 | 1783564 | 113 | sufE/lpp | > > < | N/A | Yes | Yes | Yes |  | 76.7 | 50.4 |
hrs7 | - | 1964168 | 1964063 | 78 | palI/EAM1824 | < < < | N/A | Yes | NT | No | Â | 8.7 | 0.0 |
ryhB | - | 1981794 | 1981655 | 140 | pspF/sapA | > < > | RF00057 (6.9E-13) | Yes | Yes | Yes | Â | 2.7 | 2.1 |
hrs8 | - | 2132995 | 2132831 | 165 | EAM1984/EAM1985 | < < < | RF00111 (1.1E-24) | Yes | Yes | Yes | 2132931 | 24.2 | 15.2 |
hrs9 | - | 2315585 | 2315491 | 95 | EAM2160/galE | < < < | RF01707 (2.5E-11) | Yes | Yes | No | 2315684; 2315585 | 29.6 | 39.2 |
hrs10 | + | 2356621 | 2356768 | 148 | EAM2188/EAM2189 | > > > | N/A | Yes | Yes | Yes | 2356641 | 24.0 | 42.1 |
hrs11 | - | 2399219 | 2399091 | 129 | spr/rtn | > < > | N/A | Yes | ND | Yes | 2399299 | 18.6 | 29.2 |
hrs12 | + | 2438083 | 2438169 | 87 | ompC/EAM2260 | < > > | RF00033 (6.3E-3) | Yes | Yes | Yes | 2438075 | 3.5 | 5.2 |
hrs13 | - | 2610835 | 2610754 | 82 | ansP/EAM2411 | < < < | N/A | Yes | Yes | Yes | Â | 0.3 | 11.2 |
micA | + | 2872049 | 2872162 | 114 | luxS/gshA | < > < | RF00078 (5.6E-13) | Yes | NT | Yes | Â | 68.5 | 26.3 |
gcvB | + | 2962739 | 2962947 | 209 | gcvA/EAM2720 | < > < | RF00022 (3.4E-33) | Yes | Yes | No | Â | 2.1 | 0.5 |
omrAB | - | 3009426 | 3009347 | 80 | EAM2752/EAM2753 | < < > | RF00079 (1.4E-14) | Yes | Yes | Yes | Â | 28.0 | 4.8 |
arcZ (ryhA) | + | 3399347 | 3399550 | 204 | mtgA/arcB | < > < | RF00081 (8.4E-16) | Yes | Yes | Yes | Â | 3.1 | 1.6 |
hrs15 | - | 3573610 | 3573476 | 135 | EAM3277/EAM3278 | < < > | RF00057 (5.0E-13) | Yes | NT | Yes | Â | 5.9 | 6.3 |
hrs16 | + | 3790560 | 3790675 | 116 | EAM3469/EAM3470 | > > > | N/A | Yes | NT | No | Â | 0.0 | 0.0 |
hrs17 | + | 83003 | 83246 | 244 | EAM0051/EAM0052 | < > > | N/A | No | NT | No | Â | 31.1 | 18.2 |
hrs18 | + | 500345 | 500429 | 85 | dcuA/aspA | < > < | N/A | No | NT | No | Â | 51.0 | 36.5 |
hrs19 | + | 1119874 | 1119949 | 76 | EAM1011/EAM1012 | < > < | N/A | No | Yes | No | Â | 57.4 | 73.3 |
hrs20 | - | 1212602 | 1212522 | 81 | EAM1116/EAM1117 | > < > | N/A | No | NT | Yes | Â | 16.5 | 42.9 |
hrs21 | - | 1267525 | 1267392 | 134 | gltA/sdhC | < < > | N/A | No | Yes | Yes | 1267597; 1267524 | 10.9 | 2.2 |
hrs23 | + | 1767030 | 1767167 | 138 | hmuS/EAM1643 | < > < | N/A | No | NT | No | Â | 38.1 | 62.1 |
hrs24 | - | 1794862 | 1794772 | 91 | EAM1664/EAM1665 | < < > | N/A | No | NT | No | Â | 2.4 | 0.0 |
hrs25 | - | 1894012 | 1893924 | 89 | EAM1754/EAM1755 | < < > | N/A | No | NT | No | Â | 24.1 | 11.8 |
hrs26 | - | 1909866 | 1909756 | 111 | pepT/EAM1768 | > < < | N/A | No | NT | No |  | 11.1 | 3.3 |
hrs27 | + | 1922305 | 1922405 | 101 | EAM1774/fnr | < > > | N/A | No | Yes | Yes | Â | 0.0 | 0.0 |
hrs28 | - | 1929971 | 1929863 | 109 | EAM1781/ydgI | > < > | N/A | No | NT | No | Â | 5.0 | 3.4 |
hrs29 | + | 2391802 | 2392008 | 207 | nfo/fruA | > > < | N/A | No | NT | Yes |  | 13.3 | 28.6 |
hrs30 | + | 2493229 | 2493312 | 84 | EAM2298/EAM2299 | < > < | N/A | No | NT | No | Â | 59.1 | 44.6 |
hrs31 | - | 2556693 | 2556613 | 81 | ccmA/EAM2395 | < < > | N/A | No | Yes | Yes | Â | 65.2 | 3.5 |
hrs32 | + | 2649467 | 2649520 | 54 | EAM2427/EAM2428 | < > < | N/A | No | NT | No | Â | 40.0 | 69.2 |
hrs33 | - | 2857326 | 2857206 | 121 | EAM2616/EAM2617 | > < > | N/A | No | NT | No | Â | 58.5 | 50.0 |
hrs34 | - | 3356002 | 3355930 | 73 | EAM3063/EAM3064 | < < > | N/A | No | NT | Yes | Â | 18.2 | 46.7 |