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Table 1 Genes analyzed by quantitative real-time PCR

From: Gene expression profiling of mesenteric lymph nodes from sheep with natural scrapie

Gene

Primer sequence

Size (bp)

Accession number

BBOX1

F: TGCAAACAATGTGGCTTACACA

85

NM_001101881.2**

 

R: AAGCTGAACCCCAGGTGGAT

  

CP

F: GCAGCCAGATACTGCAGGGAC

97

NM_001009733.1*

 

R: CCCGCACTGGCTCACAGTATAT

  

PFDN2

F: GCAGGTAATTGCTGGCTTCAA

84

NM_001080221.2**

 

R: TTCAACTCCATCTCCAGCTCAG

  

PSMA7

F: TAATGTCTGCATGGCATTCGC

81

NM_001034233.2**

 

R: TGGCTCTGGCATTCCACC

  

SERPINE1

F: TGTACGTGTCGCAGGCGC

83

NM_174137.2**

 

R: TACAAGGGCTGTGGAGGAGGAC

  

UCHL1

F: AACTTGATGGACGGATGCCTT

84

NM_001046172.2**

 

R: TGCAGACCTTGGCAGCGT

  

VEGFA

F: GGGCTGCTGTAATGACGAAAGT

81

NM_001025110.1*

 

R: GGTTTGATCCGCATAATCTGCA

  1. *Ovine cDNA.
  2. **Bovine cDNA.
  3. Primers (F, forward; R, reverse) used for gene amplification, amplicon size and GenBank accession numbers for the bovine cDNA sequences used for primer design.