From: Gene expression profiling of mesenteric lymph nodes from sheep with natural scrapie
Term | P value | ProbeName | FC (C vs NC) | FC (PC vs NC) | Gene symbol | Gene name | Citation |
---|---|---|---|---|---|---|---|
Glycoprotein | 5.16E-04 | A_70_P042906 | 2.22 | 1.00 | AQP1 | Aquaporin 1 (Colton blood group) | Â |
CUST_5666_PI375351158 | −2.02 | −1.16 | AQP4 | Aquaporin 4 | [10] | ||
A_70_P041077 | 2.09 | 1.39 | PTGER3 | Prostaglandin E receptor 3 (subtype EP3) | Â | ||
A_70_P030356 | 1.48 | −2.06 | SLC11A1 | Solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 |  | ||
A_70_P051037 | −2.09 | 2.85 | SLC2A5 | Solute carrier family 2 (facilitated glucose/fructose transporter), member 5 | [10] | ||
A_70_P036386 | −1.29 | −2.01 | UCHL1* | Ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) |  | ||
Extracellular region | 5.37E-04 | CUST_2502_PI375351158 | 2.26 | 2.76 | BMPER | BMP binding endothelial regulator | Â |
A_70_P006426 | 4.26 | 1.06 | FGL1 | Fibrinogen-like 1 | Â | ||
A_70_P069571 | 2.05 | 1.93 | FIBIN | Fin bud initiation factor homolog (zebrafish) | Â | ||
A_70_P038041 | 1.95 | −3.63 | HP | Haptoglobin | [10] | ||
CUST_3439_PI375351158 | 2.70 | 1.38 | PIGR | Polymeric immunoglobulin receptor | Â | ||
A_70_P035871 | 1.03 | −3.29 | SERPINE1* | Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 |  | ||
A_70_P039451 | −1.57 | −2.28 | SFN | Stratifin |  | ||
A_70_P050922 | 2.19 | −1.06 | VEGFA* | Vascular endothelial growth factor A |  | ||
Disulfide bond | 1.10E-03 | CUST_598_PI375351158 | 2.28 | 1.33 | FABP5 | Fatty acid binding protein 5 (psoriasis-associated) | Â |
A_70_P070736 | −3.83 | −1.06 | TXNRD1 | Thioredoxin reductase 1 |  | ||
Cell cycle | 1.17E-03 | A_70_P058586 | −2.85 | −1.55 | PSMA7* | Proteasome (prosome, macropain) subunit, alpha type, 7 |  |
A_70_P057841 | −1.61 | −2.51 | BRCA2 | Breast cancer 2, early onset |  | ||
A_70_P053686 | 1.11 | −2.01 | CCNDBP1 | Cyclin D-type binding-protein 1 |  | ||
A_70_P060136 | −1.48 | −2.04 | CGREF1 | Cell growth regulator with EF-hand domain 1 |  | ||
A_70_P027076 | −2.79 | −1.28 | EID1 | EP300 interacting inhibitor of differentiation 1 |  | ||
A_70_P007666 | −2.87 | −1.61 | KIF2C | Kinesin family member 2C |  | ||
A_70_P011891 | −2.34 | −1.29 | MND1 | Meiotic nuclear divisions 1 homolog (S. cerevisiae) |  | ||
A_70_P009551 | −2.13 | −1.07 | NCAPG | Non-SMC condensin I complex, subunit G |  | ||
A_70_P037556 | −2.12 | 1.01 | NDC80 | NDC80 homolog, kinetochore complex component (S. cerevisiae) |  | ||
A_70_P034256 | −2.20 | 1.05 | TFDP2 | Transcription factor Dp-2 (E2F dimerization partner 2) |  | ||
A_70_P061801 | −2.01 | −1.39 | UBE2C | Ubiquitin-conjugating enzyme E2C |  | ||
Condensed chromosome | 1.71E-03 | CUST_7895_PI375351158 | −2.79 | −1.15 | HMGB1 | High-mobility group box 1 |  |
A_70_P003816 | −2.20 | −1.67 | TEX12 | Testis expressed 12 |  | ||
Alternative splicing | 2.04E-03 | A_70_P059171 | −2.57 | −2.17 | CLTA | Clathrin, light chain (Lca) |  |
A_70_P033441 | 1.13 | 2.27 | MEST | Mesoderm specific transcript homolog (mouse) | Â | ||
A_70_P039536 | −2.86 | −1.34 | MX1 | Myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse) |  | ||
A_70_P060791 | 2.25 | 1.38 | PEG3 | Paternally expressed 3 | Â | ||
A_70_P015446 | −1.52 | −2.13 | UNC50 | Unc-50 homolog (C. elegans) |  | ||
Chromosome | 2.20E-03 | A_70_P065046 | −2.68 | −1.32 | JRKL | Jerky homolog-like (mouse) |  |
A_70_P040916 | −2.62 | −1.67 | ORC1L | Origin recognition complex, subunit 1-like (yeast) |  | ||
CUST_12205_PI375351158 | −2.04 | −1.20 | TOP2A | Topoisomerase (DNA) II alpha 170 kDa | [33] | ||
Extracellular matrix | 3.15E-03 | A_70_P021711 | −2.19 | −1.69 | COL1A1 | Collagen, type I, alpha 1 | |
CUST_11292_PI375351158 | 2.40 | 1.12 | CRISPLD2 | Cysteine-rich secretory protein LCCL domain containing 2 | Â | ||
A_70_P007356 | 2.20 | 1.26 | DCN | Decorin | |||
CUST_7449_PI375351158 | 1.46 | −2.05 | DPT | Dermatopontin |  | ||
A_70_P032476 | 2.45 | −1.35 | MFAP5 | Microfibrillar associated protein 5 | [10] | ||
A_70_P058626 | 2.27 | 1.13 | VWF | Von Willebrand factor | Â | ||
Signal peptide | 3.25E-03 | A_70_P064081 | 2.44 | −2.18 | CA4 | Carbonic anhydrase IV |  |
A_70_P061221 | 1.20 | −2.43 | P4HA1 | Prolyl 4-hydroxylase, alpha polypeptide I | |||
A_70_P040831 | −2.09 | −1.07 | SELL | Selectin L |  | ||
Tumor suppressor | 1.47E-02 | A_70_P035971 | 2.05 | −1.75 | VWA5A | Von Willebrand factor A domain containing 5A |  |
A_70_P026737 | 3.11 | −1.41 | WT1 | Wilms tumor 1 |  | ||
A_70_P061691 | 1.26 | 2.26 | HPGD | Hydroxyprostaglandin dehydrogenase 15-(NAD) | Â | ||
Cytoplasm | 1.82E-02 | A_70_P016337 | −1.78 | −2.72 | HMMR | Hyaluronan-mediated motility receptor (RHAMM) |  |
CUST_12176_PI375351158 | −1.04 | −2.92 | ACTG2 | Actin, gamma 2, smooth muscle, enteric |  | ||
A_70_P019656 | 1.01 | 3.59 | ADH1A | Alcohol dehydrogenase 1A (class I), alpha polypeptide | Â | ||
A_70_P045301 | 3.70 | 2.33 | BBOX1* | Butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 | Â | ||
A_70_P069971 | −2.09 | −1.73 | CDC42EP5 | CDC42 effector protein (Rho GTPase binding) 5 |  | ||
CUST_5823_PI375351158 | 1.12 | 2.07 | NIN | Ninein (GSK3B interacting protein) | Â | ||
A_70_P018021 | −3.25 | −1.15 | PAIP2 | Poly(A) binding protein interacting protein 2 |  | ||
A_70_P054126 | −2.16 | −1.11 | PHAX | Phosphorylated adaptor for RNA export |  | ||
A_70_P044246 | 1.26 | −2.14 | RRAGD | Ras-related GTP binding D |  | ||
A_70_P055106 | 2.05 | 1.07 | SORBS2 | Sorbin and SH3 domain containing 2 | Â | ||
A_70_P025726 | −2.39 | −1.60 | STMN2 | Stathmin-like 2 |  | ||
A_70_P060991 | −2.80 | 1.21 | CA3 | Carbonic anhydrase III, muscle specific |  | ||
Fatty acid metabolism | 2.26E-02 | CUST_8730_PI375351158 | 1.06 | −2.05 | ACSL4 | Acyl-CoA synthetase long-chain family member 4 |  |
A_70_P039986 | −1.27 | 2.39 | SLC27A2 | Solute carrier family 27 (fatty acid transporter), member 2 |  | ||
Phosphatidic acid metabolic process | 2.86E-02 | A_70_P039726 | −2.50 | −1.10 | AGPAT1 | 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) |  |
A_70_P025121 | −3.34 | −1.30 | PLA2G2A | Phospholipase A2, group IIA (platelets, synovial fluid) |  | ||
Protein dimerization activity | 2.91E-02 | CUST_206_PI396851701 | 2.04 | −2.28 | FOS | v-fos FBJ murine osteosarcoma viral oncogene homolog | |
CUST_10535_PI375351158 | −2.41 | −2.41 | NFE2L1 | Nuclear factor (erythroid-derived 2)-like 1 |  | ||
Zinc finger, C2H2-type | 3.09E-02 | CUST_13307_PI375351158 | −2.34 | −1.26 | ATMIN | ATM interactor |  |
A_70_P036056 | −2.65 | −1.71 | KLF6 | Kruppel-like factor 6 |  | ||
A_70_P065371 | −2.27 | −1.13 | ZCCHC6 | Zinc finger, CCHC domain containing 6 |  | ||
A_70_P014286 | 1.33 | 2.01 | ZNF45 | Zinc finger protein 45 | Â | ||
Cytoplasmic membrane-bounded vesicle | 3.21E-02 | A_70_P062831 | −3.71 | −1.48 | EHD3 | EH-domain containing 3 |  |
A_70_P044621 | 2.27 | −1.04 | MALL | Mal, T-cell differentiation protein-like |  | ||
Metal ion transport | 3.39E-02 | A_70_P030126 | −2.36 | 1.24 | CP* | Ceruloplasmin (ferroxidase) | |
CUST_12632_PI375351158 | 2.28 | 1.50 | KCTD12 | Potassium channel tetramerisation domain containing 12 | Â | ||
A_70_P027206 | 2.15 | 2.10 | SLC30A1 | Solute carrier family 30 (zinc transporter), member 1 | |||
A_70_P050456 | −2.65 | −1.58 | SLC38A10 | Solute carrier family 38, member 10 |  | ||
Antimicrobial | 5.05E-02 | CUST_139_PI396851701 | 15.26 | −1.74 | CATHL1 | Cathelicidin 1 |  |
CUST_3993_PI375351158 | 5.96 | −1.25 | S100A8 | S100 calcium binding protein A8 | [10] | ||
Apoptosis | 5.45E-02 | CUST_260_PI396851701 | −2.04 | −1.55 | CARD6 | Caspase recruitment domain family, member 6 |  |
A_70_P022526 | −2.29 | −1.16 | OPA1 | Optic atrophy 1 (autosomal dominant) |  | ||
A_70_P049526 | −1.12 | −2.70 | PERP | PERP, TP53 apoptosis effector |  | ||
A_70_P069836 | −3.14 | −1.31 | RNF130 | Ring finger protein 130 |  | ||
A_70_P067091 | −2.90 | −1.55 | UBE2Z | Ubiquitin-conjugating enzyme E2Z |  | ||
Immunoglobulin-like fold | 5.55E-02 | A_70_P036361 | 2.06 | 2.09 | CD1E | CD1e molecule | Â |
CUST_9656_PI375351158 | −2.03 | 1.11 | FGFR2 | Fibroblast growth factor receptor 2 |  | ||
CUST_12141_PI375351158 | 2.64 | −1.00 | IGK | Ig kappa chain |  | ||
A_70_P016986 | −2.23 | 1.16 | TRD@ | T cell receptor delta locus | [11] | ||
Secreted | 5.70E-02 | A_70_P048761 | 1.34 | −2.27 | SPINK5 | Serine peptidase inhibitor, Kazal type 5 |  |
CUST_9580_PI375351158 | 1.13 | −2.49 | MMRN1 | Multimerin 1 |  | ||
CUST_10101_PI375351158 | −1.07 | −2.53 | NPNT | Nephronectin |  | ||
A_70_P034356 | 2.88 | 1.19 | SEMA3G | Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G | Â | ||
A_70_P063891 | 2.38 | −1.22 | PCOLCE2 | Procollagen C-endopeptidase enhancer 2 |  | ||
GTP binding | 7.49E-02 | A_70_P019676 | 4.33 | 1.16 | ACSM1 | Acyl-CoA synthetase medium-chain family member 1 | [10] |
A_70_P046951 | −2.24 | −1.02 | ARL4C | ADP-ribosylation factor-like 4C |  | ||
A_70_P008796 | −2.06 | 1.15 | DOCK11 | Dedicator of cytokinesis 11 |  | ||
A_70_P000126 | −3.63 | −1.82 | GBP4 | Guanylate binding protein 4 |  | ||
Disulfide bond | 7.58E-02 | A_70_P018376 | 2.56 | −1.08 | FAP | Fibroblast activation protein, alpha |  |
A_70_P041321 | −2.15 | −2.57 | IGHA2 | Immunoglobulin heavy constant alpha 2 (A2m marker) |  | ||
Structural molecule activity | 8.04E-02 | A_70_P028306 | −2.03 | −1.05 | LMNB1 | Lamin B1 |  |
CUST_13373_PI375351158 | −2.15 | −1.29 | LOC531679 | Ribosomal protein 17-like; similar to 60S ribosomal Protein L17 (L23); similar to ribosomal protein L17; similar to Rpl17 protein; similar to mCG3798 |  | ||
CUST_7057_PI375351158 | −2.33 | −1.07 | LOC789587 | Similar to Ribosomal_L22 domain containing protein RGD1359290 |  | ||
A_70_P031441 | −2.43 | −1.79 | VCL | Vinculin | [11] | ||
Positive regulation of inflammatory response | 9.48E-02 | A_70_P058551 | 8.25 | −1.12 | FABP4 | Fatty acid binding protein 4, adipocyte |  |
CUST_9779_PI375351158 | −1.40 | −2.38 | IDO1 | Indoleamine 2,3-dioxygenase 1 |  | ||
Other |  | CUST_13467_PI375351158 | 1.29 | −2.14 | FBP2 | Fructose-1,6-bisphosphatase 2 |  |
A_70_P055306 | 2.77 | 1.50 | SLC43A1 | Solute carrier family 43, member 1 | Â | ||
A_70_P049406 | −1.99 | −2.32 | EIF5 | Eukaryotic translation initiation factor 5 | [11] | ||
A_70_P070931 | −2.87 | −1.18 | NUDT19 | Nudix (nucleoside diphosphate linked moiety X)-type motif 19 |  | ||
A_70_P036101 | 1.22 | −3.18 | NOP10 | NOP10 ribonucleoprotein homolog (yeast) | [11] | ||
A_70_P011091 | −2.74 | −2.01 | PFDN2* | Prefoldin subunit 2 |  | ||
A_70_P039656 | 17.20 | −1.52 | BAC5 | 5 kDa bactinecin precursor |  | ||
A_70_P061341 | −1.03 | −2.94 | C11ORF10 | Chromosome 11 open reading frame 10 |  | ||
A_70_P061266 | 2.36 | 1.03 | C5ORF43 | Chromosome 5 open reading frame 43 | Â | ||
A_70_P051377 | 14.99 | −1.48 | CATHL1B | Procyclic dodecapeptide |  | ||
A_70_P015101 | −2.70 | −1.03 | CCDC82 | Coiled-coil domain containing 82 |  | ||
A_70_P012541 | −1.02 | −2.36 | CNN1 | Calponin 1, basic, smooth muscle |  | ||
A_70_P002841 | 2.03 | 1.48 | EPAS | Endothelial PAS domain protein 1 | Â | ||
A_70_P008841 | −2.18 | −1.23 | EPSTI1 | Epithelial stromal interaction 1 (breast) |  | ||
A_70_P060756 | −2.12 | 1.08 | FAM190B | KIAA1128 |  | ||
A_70_P062951 | 2.05 | 1.12 | FNDC3B | Fibronectin type III domain containing 3B | [33] | ||
A_70_P051181 | 2.76 | 1.28 | HSD11K | NAD-dependent 11-beta-hydroxysteroid dehydrogenase | Â | ||
CUST_46_PI396851701 | −2.06 | −2.15 | IGHA | Immunoglobulin heavy constant alpha |  | ||
A_70_P024671 | 2.46 | 1.31 | INHBB | Inhibin, beta B | Â | ||
A_70_P033656 | −2.34 | −1.77 | ISG12(A) | ISG12(a) protein-like |  | ||
A_70_P012537 | −2.19 | −3.58 | LGALS15 | Galectin 15 |  | ||
CUST_3620_PI375351158 | −1.58 | −2.22 | LGALS16 | Beta-galactoside-binding lectin |  | ||
A_70_P020131 | −1.10 | −3.84 | LGALS9C | Lectin, galactoside-binding, soluble, 9C |  | ||
CUST_6089_PI375351158 | −2.02 | −1.71 | LOC100140018 | Similar to cytochrome P450, family 2, subfamily J |  | ||
A_70_P016801 | −2.20 | −1.48 | LOC443321 | Lysozyme 2a precursor |  | ||
A_70_P026671 | −1.91 | −2.05 | LOC524810 | IgM |  | ||
A_70_P023026 | 3.09 | 1.74 | LOC615697 | Similar to cytochrome P450 | Â | ||
A_70_P039266 | −2.03 | −1.83 | LOC654331 | Pancreatitis-associated protein I | [10] | ||
A_70_P039271 | −3.94 | −7.40 | MCP-4 | Mast cell proteinase-4 |  | ||
CUST_11558_PI375351158 | 2.00 | 2.23 | MGC140754 | Hypothetical LOC508613 | Â | ||
CUST_9725_PI375351158 | −2.26 | −3.77 | PLAC8 | Placenta-specific 8 |  | ||
CUST_10114_PI375351158 | 2.56 | 1.15 | RN18S1 | 18S ribosomal RNA | Â | ||
A_70_P030132 | −2.40 | −1.71 | RTP4 | Receptor (chemosensory) transporter protein 4 | [34] | ||
A_70_P030426 | 10.95 | 1.39 | SC5 | Cathelin-related prepropeptide | Â |