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Table 5 FPKM for Turion-specific genes and DE transcriptional factors

From: RNA-Seq transcriptome analysis of Spirodela dormancy without reproduction

  Gene ID

Fold change

Frond FPKM

Turion FPKM

Directionality

Annotation

Spipo14G0001200

NA

0.0

31.0

Up-regulated

Late embryogenesis abundant protein LEA

Spipo5G0015500

NA

0.0

45.8

Up-regulated

Late embryogenesis abundant protein LEA

Spipo0G0166800

170

1.4

235.2

Up-regulated

Late embryogenesis abundant protein LEA

Spipo1G0033500

34

3.4

114.8

Up-regulated

Late embryogenesis abundant protein LEA

Spipo26G0007700

17

8.4

140.0

Up-regulated

Late embryogenesis abundant protein LEA

Spipo4G0008600

5

6.1

33.1

Up-regulated

bZIP transcription factor A

Spipo8G0037600

11

1.1

11.6

Up-regulated

Heat shock transcription factor A2

Spipo9G0002000

5

14.2

67.8

Up-regulated

Heat shock transcription factor A2

Spipo0G0155100

13

1.7

21.5

Up-regulated

Ethylene-responsive transcription factor 1

Spipo3G0031800

7

10.3

74.2

Up-regulated

Ethylene-responsive transcription factor 2

Spipo20G0027700

5

10.6

53.1

Up-regulated

Ethylene-responsive transcription factor 3

Spipo11G0028200

7

32.7

4.4

Down-regulated

Ethylene-responsive transcription factor 4

Spipo8G0045500

7

11.3

1.7

Down-regulated

WRKY transcription factor, putative

Spipo2G0055800

4

17.1

4.0

Down-regulated

bZIP transcription factor I