Trait | SNP name | Chr | Position (bp) | log(10)P |   Within Gene | 100 kb LD | <500 kb LD | Gene name |
---|---|---|---|---|---|---|---|---|
Fat | ARS-BFGL-NGS-4939 | 14 | 1801116 | 255.551 |   DGAT1 |  |  | diacylglycerol O-acyltransferase 1 |
BTB-00932332 | 26 | 22118554 | 24.142 |   BRTC |  |  | Beta-transducin repeat containing | |
BovineHD0500026662 | 5 | 93945655 | 23.718 | Â | MGST1 | Â | microsomal glutathione S-transferase 1 | |
BovineHD1800017481 | 18 | 60506726 | 12.907 |   LOC788871 |  |  | zinc finger protein 85-like | |
BovineHD1200015001 | 12 | 54273515 | 12.918 | Â | Â | RNF219 | ring finger protein 219 | |
Milk | ARS-BFGL-NGS-4939 | 14 | 1801116 | 416.491 |   DGAT1 |  |  | diacylglycerol O-acyltransferase 1 |
BovineHD2000009925 | 20 | 34582764 | 44.167 | Â | Â | LOC782462 | sorting nexin-13-like | |
BovineHD0500026852 | 5 | 94562606 | 24.636 |   EPS8 |  |  | epidermal growth factor receptor pathway substrate 8 | |
BovineHD0600024338 | 6 | 88865430 | 22.814 | Â | Â | GC | group-specific component (vitamin D binding protein) | |
BovineHD4100003579 | 5 | 32784231 | 19.562 |   RPAP3 |  |  | RNA polymerase II associated protein 3 | |
Protein | ARS-BFGL-NGS-4939 | 14 | 1801116 | 144.166 |   DGAT1 |  |  | diacylglycerol O-acyltransferase 1 |
BovineHD4100005296 | 6 | 87180731 | 31.840 |   CSN2 |  |  | casein beta | |
BovineHD2600004009 | 26 | 15654751 | 21.778 |   PLCE1 |  |  | phospholipase C, epsilon 1 | |
BovineHD0500029843 | 5 | 104307736 | 19.303 |   CD27 |  |  | CD27 molecule | |
BovineHD2600011254 | 26 | 40809501 | 18.214 | Â | Â | PPAPDC1A | phosphatidic acid phosphatase type 2 domain containing 1A | |
Fat% | ARS-BFGL-NGS-4939 | 14 | 1801116 | 1684.117 |   DGAT1 |  |  | diacylglycerol O-acyltransferase 1 |
BovineHD0500026662 | 5 | 93945655 | 93.370 | Â | MGST1 | Â | microsomal glutathione S-transferase 1 | |
BovineHD2000009925 | 20 | 34582764 | 61.199 | Â | Â | LOC782462 | sorting nexin-13-like | |
ARS-BFGL-NGS-57448 | 27 | 36155097 | 32.124 |   GINS4 |  |  | GINS complex subunit 4 (Sld5 homolog) | |
BovineHD0200034371 | 2 | 119076939 | 13.851 | Â | SP110 | Â | SP110 nuclear body protein | |
Protein% | ARS-BFGL-NGS-4939 | 14 | 1801116 | 398.865 |   DGAT1 |  |  | diacylglycerol O-acyltransferase 1 |
BovineHD2000009927 | 20 | 34587828 | 180.352 | Â | Â | LOC782462 | sorting nexin-13-like | |
BovineHD0600023879 | 6 | 87160102 | 70.809 | Â | CAS1A | Â | casein alpha s1 | |
BovineHD0300005054 | 3 | 15451257 | 44.404 |   GBA |  |  | glucosidase, beta, acid | |
BovineHD4100003579 | 5 | 32784231 | 34.001 |   RPAP3 |  |  | RNA polymerase II associated protein 3 | |
Fertility | BovineHD1800016761 | 18 | 57548213 | 7.445 |   LOC786539 |  |  | carcinoembryonic antigen-related cell adhesion molecule 18-like |
BovineHD0600024357 | 6 | 88922396 | 6.712 | Â | Â | NPFFR2 | neuropeptide FF receptor 2 | |
BovineHD0500024481 | 5 | 86451512 | 6.441 | Â | Â | SOX5 | SRY (sex determining region Y)-box 5 | |
BovineHD0400015668 | 4 | 57384888 | 6.371 | Â | Â | LOC100298628 | HIG1 domain family, member 1D-like pseudogene | |
BovineHD0100005095 | 1 | 16862494 | 6.215 |   LOC100140852 |  |  | magnesium transporter NIPA2-like | |
Mamm. System | BovineHD2600006024 | 26 | 23379482 | 9.478 |   SUFU |  |  | suppressor of fused homolog (Drosophila) |
BovineHD0200030267 | 2 | 105149497 | 8.263 |   SMARCAL1 |  |  | SWI/SNF related, matrix assoc., actin dep. Reg. of chromatin, subfamily a-like 1 | |
BovineHD1100008368 | 11 | 28171549 | 8.175 |   PRKCE |  |  | protein kinase C, epsilon | |
BovineHD0200035718 | 2 | 123208383 | 8.069 | Â | SDC3 | Â | syndecan 3 | |
BovineHD2000008146 | 20 | 27565339 | 7.890 | Â | Â | ISL1 | ISL LIM homeobox 1 | |
Survival | BovineHD1100031193 | 11 | 107227039 | 67.300 | Â | NLRP6 | Â | NLR family, pyrin domain containing 6 |
Hapmap40387-BTA-107848 | 9 | 104960154 | 35.305 | Â | WDR27 | Â | WD repeat domain 27 | |
BovineHD3000041679 | 30 | 144726003 | 33.731 | Â | Â | TBL1X | transducin (beta)-like 1X-linked | |
BovineHD2000006692 | 20 | 22290945 | 31.258 | Â | MIER3 | Â | mesoderm induction early response 1, family member 3-like | |
BovineHD1700000492 | 17 | 2237102 | 30.497 | Â | Â | NPY2R | neuropeptide Y receptor Y2 | |
SCC | ARS-BFGL-NGS-92033 | 1 | 2582894 | 12.503 | Â | MIS18A | Â | MIS18 kinetochore protein homolog A (S. pombe) |
ARS-BFGL-NGS-57102 | 3 | 31219298 | 10.716 | Â | CTTNBP2NL | Â | CTTNBP2 N-terminal like | |
BTA-104934-no-rs | 7 | 67940770 | 10.324 |   LARP1 |  |  | La ribonucleoprotein domain family, member 1 | |
BovineHD1100009904 | 11 | 32859722 | 9.169 |   NRXN1 |  |  | neurexin 1 | |
 | BovineHD1600008712 | 16 | 30646220 | 8.556 |  | ADCK3 |  | aarF domain containing kinase 3 |