Development of highly polymorphic simple sequence repeat markers using genome-wide microsatellite variant analysis in Foxtail millet [Setaria italica (L.) P. Beauv.]

Table 2 Sampled accessions for SSRs characterization in Setaria

Trial No.	Accession no. or cultivar	Species	Haploid genome^a	Origin	Group
1	Krust Born	S. italica	A	Holland	Foxtail millet, landraces
2	Chuang229	S. italica	A	Missouri, US
3	00021281	S. italica	A	Gansu, China
4	00011036	S. italica	A	Shandong, China
5	00021406	S. italica	A	Heilongjiang, China
6	00003114	S. italica	A	Inner Mongolia, China
7	00022330	S. italica	A	Tibet, China
8	00026459	S. italica	A	Guangxi, China
9	Yugu1	S. italica	A	Henan, China	Foxtail millet, cultivars
10	Jigu31	S. italica	A	Hebei, China
11	Lugu10	S. italica	A	Shandong, China
12	Mengfenggu7	S. italica	A	Inner Mongolia, China
13	Yangu11	S. italica	A	Shanxi, China
14	Longgu10	S. italica	A	Gansu, China
15	Changnong35	S. italica	A	Shanxi, China
16	Gonggu61	S. italica	A	Jilin, China
17	Chaogu14	S. italica	A	Liaoning, China
18	Longgu30	S. italica	A	Heilongjiang, China
19	Q24	S. viridis	A	Shijiazhuang, China	Green foxtail
20	N10	S. viridis	A	Gansu, China
21	W60	S. viridis	A	Japan
22	W57	S. viridis	A	France
23	W58	S. viridis	A	Oklahoma, US
24	W53	S. viridis	A	Uzbekistan
25	W5	S. faberii	AB	Russia	Other setaria species
26	W10	S. glauca	D	Japan
27	W42	S. verticillata	AB	France
28	W94	S. adhaerans	B	Spain

a: Genome type defined in previously published works based on genomic in situ hybridization analysis [36].

ISSN: 1471-2164