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Figure 3 | BMC Genomics

Figure 3

From: ITEP: An integrated toolkit for exploration of microbial pan-genomes

Figure 3

Ribosomal proteins apparently missing in draft genomes and present in all complete genomes. The heat map shows the presence (red) and absence (black) of the 17 ribosomal proteins that, according to RefSeq gene calls and the MCL clustering approach, were present in all complete Group 1 Clostridia genomes but missing in at least one draft genome within the same phylogenetic clades as the completely sequenced genomes. Blue strains: Completely sequenced genomes; green strains: draft genomes in the same clade as completely sequenced genomes; black strains: draft genomes in different clades from completely sequenced genomes. The tree is the same as that generated in Figure 2 and was visualized with ITEP scripts with some formatting changes (genome colors and column labels).

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