A systematic analysis of protein palmitoylation in Caenorhabditis elegans

BMC Genomics

Table 1 C. elegans strain and RNAi clone availability

Gene	Gene code	Available mutant(s) (allele)	RNAi clone source
dhhc-1	F09B12.2	tm4272 ( *tm4272* )	Vidal library
dhhc-2	Y47H9C.2	RB1044 ( *ok990* )	Vidal library
dhhc-3	F33D11.12		In-house
dhhc-4	ZK757.4		In-house
dhhc-5	R13F6.5		Vidal library
dhhc-6	M18.8		In-house
dhhc-7	C17D12.1		Vidal library
dhhc-8	Y39E4B.7		In-house
dhhc-9	C43H6.7	VC2067 ( *gk985* )	Vidal library
dhhc-10	K02G10.1		Vidal library
dhhc-11	T22E7.2		Vidal library
dhhc-12	F59C6.2	VC2039 ( *gk1013* ), VC2244 ( *gk981* )	Vidal library
dhhc-13	H32C10.3	VC108 ( *gk36* )	In-house
dhhc-14	D2021.2	VC771 ( *gk330* ), VC918 ( *ok1032* )	In-house
spe-10	AC3.10	BA744 ( *hc104* )	In-house
ath-1	K04G2.5	RB1484 ( *ok1735* )	Vidal library
ppt-1	F44C4.5	MN1 ( *gk139* ), VC166 ( *gk131* ), VC168 ( *gk134* ), VC183 (gk139), VC184 (gk140)	Vidal library

The DHHC (dhhc-1 to -14 and spe-10) and PPT (ath-1 and ppt-1) genes and their sequence codes in C. elegans are listed. If a C. elegans strain containing a mutation in the gene-of-interest only is available, it is shown here along with the allele identifier in parentheses. Strains shown in bold were used in this study. More detailed information on the mutations can be found in Additional file 5. RNAi clones were either obtained from the Vidal C. elegans ORF RNAi Library [39] or made in-house. ath, acyl-protein thioesterase; spe, spermatogenesis-deficient.

ISSN: 1471-2164