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Table 4 The differential gene expression of Serine/threonine-protein kinase genes in each comparison

From: A transcriptomic analysis of Chrysanthemum nankingense provides insights into the basis of low temperature tolerance

Comparison

GeneID

log2 ratio

Up-down- regulation

P-value

FDR

Gene description

CK vs A

Unigene48078_S2_3

4.56

Up

7.02E-79

1.54E-76

Serine/threonine-protein kinase Nek8

CL6510.Contig1_S2_3

3.24

Up

1.54E-11

4.57E-10

serine/threonine-protein kinase SRK2I-like

Unigene24393_S2_1

3.24

Up

8.16E-10

2.05E-08

probable serine/threonine-protein kinase WNK11-like

Unigene84010_S2_3

2.88

Up

0.00000574

0.0000881

G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like

Unigene6145_S2_3

1.86

Up

0.00000809

0.000120748

serine/threonine-protein kinase SRK2B-like

Unigene82172_S2_1

1.67

Up

5.09E-12

1.58E-10

LRR receptor-like serine/threonine-protein kinase FLS2-like

CL5751.Contig4_S2_3

1.46

Up

4.35E-29

3.28E-27

serine/threonine-protein kinase GRIK2-like

Unigene77363_S2_3

1.08

Up

2.51E-14

9.25E-13

receptor-like serine/threonine-protein kinase ALE2-like

CL2322.Contig2_S2_3

1.00

Up

2.16E-12

6.91E-11

serine/threonine-protein kinase HT1-like

Unigene51530_S2_3

-2.51

Down

7.52E-08

0.00000153

LRR receptor-like serine/threonine-protein kinase At4g37250-like

CL2131.Contig1_S2_1

-2.44

Down

1.66E-57

2.62E-55

G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like

Unigene74903_S2_1

-2.21

Down

1.68E-14

6.25E-13

LRR receptor-like serine/threonine-protein kinase At4g37250-like

CL102.Contig1_S2_1

-2.04

Down

0.0000201

0.000280649

serine/threonine-protein kinase At5g41260

Unigene86891_S2_3

-1.76

Down

0.000000168

0.00000325

LRR receptor-like serine/threonine-protein kinase At1g53430

Unigene62396_S2_1

-1.75

Down

1.86E-17

8.16E-16

LRR receptor-like serine/threonine-protein kinase At1g07650-like

Unigene5608_S2_1

-1.71

Down

2.73E-22

1.55E-20

LRR receptor-like serine/threonine-protein kinase At1g56130-like isoform 1

Unigene82743_S2_1

-1.51

Down

0.000000303

0.00000565

LRR receptor-like serine/threonine-protein kinase At4g37250-like

CL6249.Contig1_S2_1

-1.15

Down

1.28E-10

3.51E-09

receptor-like serine/threonine-protein kinase At2g45590-like

Unigene599_S2_1

1.94

Up

5.48E-16

1.08E-13

LRR receptor-like serine/threonine-protein kinase At3g47570-like

CL528.Contig2_S2_1

1.85

Up

0.0000101

0.000555903

G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like

CL11839.Contig2_S2_3

1.56

Up

0.000000918

0.0000626

G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like

CL11232.Contig1_S2_3

1.46

Up

1.35E-11

1.85E-09

serine/threonine-protein kinase RLCKVII-like

Unigene7157_S2_3

1.45

Up

7.74E-08

0.00000642

LRR receptor-like serine/threonine-protein kinase GSO1-like

Unigene82172_S2_1

1.38

Up

6.47E-08

0.00000544

LRR receptor-like serine/threonine-protein kinase FLS2-like

CL5137.Contig1_S2_1

1.27

Up

2.98E-09

0.00000031

LRR receptor-like serine/threonine-protein kinase GSO1-like

Unigene35893_S2_1

1.09

Up

1.1E-09

0.000000122

G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5-like

Unigene13659_S2_3

1.01

Up

0.00000506

0.000296619

inactive leucine-rich repeat receptor-like serine/threonine-protein kinase

Unigene62396_S2_1

-1.43

Down

2.37E-13

3.75E-11

LRR receptor-like serine/threonine-protein kinase At1g07650-like

CK vs C1

Unigene48078_S2_3

4.86

Up

1.6412E-101

4.5942E-99

Serine/threonine-protein kinase Nek8, putative

Unigene24393_S2_1

3.17

Up

2.28788E-09

5.51317E-08

serine/threonine-protein kinase WNK11-like

CL6510.Contig1_S2_3

2.74

Up

1.7455E-07

3.36939E-06

serine/threonine-protein kinase SRK2I-like

Unigene6145_S2_3

2.13

Up

6.15014E-08

1.26115E-06

serine/threonine-protein kinase SRK2B-like

Unigene77360_S2_3

1.83

Up

5.63286E-05

0.000724311

probable serine/threonine-protein kinase At1g54610-like

CL8653.Contig4_S2_3

1.72

Up

2.68074E-05

0.000365143

serine/threonine-protein kinase HT1-like

CL812.Contig8_S2_3

1.65

Up

6.44362E-05

0.000817344

serine/threonine-protein kinase SAPK3

CL2322.Contig2_S2_3

1.33

Up

1.25092E-23

7.73232E-22

serine/threonine-protein kinase HT1-like

CL5751.Contig4_S2_3

1.33

Up

5.47232E-24

3.44379E-22

serine/threonine-protein kinase GRIK2-like

CL3545.Contig5_S2_3

1.19

Up

2.89914E-31

2.39887E-29

serine/threonine-protein kinase At5g41260

Unigene82172_S2_1

1.09

Up

0.000041836

0.000548576

LRR receptor-like serine/threonine-protein kinase FLS2-like

Unigene42172_S2_3

1.02

Up

2.83884E-23

1.71985E-21

serine/threonine-protein kinase AtPK2/AtPK19-like

Unigene85255_S2_3

1.01

Up

1.19271E-05

0.000173177

receptor-like serine/threonine-protein kinase At2g45590-like

Unigene51530_S2_3

-3.58

Down

7.18962E-11

1.99504E-09

LRR receptor-like serine/threonine-protein kinase At4g37250-like

Unigene74903_S2_1

-2.56

Down

1.88547E-17

8.4618E-16

LRR receptor-like serine/threonine-protein kinase At4g37250-like

CL102.Contig1_S2_1

-2.28

Down

3.3508E-06

5.3771E-05

serine/threonine-protein kinase At5g41260

Unigene74228_S2_1

-2.12

Down

2.61668E-63

4.61793E-61

serine/threonine-protein kinase cx32, putative

CL2131.Contig1_S2_1

-1.93

Down

1.20746E-44

1.451E-42

G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like

Unigene86891_S2_3

-1.90

Down

2.01214E-08

4.3637E-07

LRR receptor-like serine/threonine-protein kinase At1g53430

Unigene62396_S2_1

-1.74

Down

7.77284E-18

3.56502E-16

LRR receptor-like serine/threonine-protein kinase At1g07650-like

CL6249.Contig1_S2_1

-1.45

Down

8.25782E-15

3.1245E-13

receptor-like serine/threonine-protein kinase At2g45590-like

Unigene5608_S2_1

-1.39

Down

2.98124E-17

1.32493E-15

LRR receptor-like serine/threonine-protein kinase At1g56130-like isoform 1

Unigene28326_S2_1

-1.11

Down

1.13529E-22

6.61992E-21

receptor-like serine/threonine-protein kinase ALE2-like

CK vs C2

CL10252.Contig2_S2_1

10.43

Up

0.0000214

0.000279936

serine/threonine-protein kinase HT1-like

Unigene48078_S2_3

4.65

Up

1.32E-84

2.96E-82

Serine/threonine-protein kinase Nek8, putative

CL6510.Contig1_S2_3

3.48

Up

3.57E-14

1.21E-12

serine/threonine-protein kinase SRK2I-like

Unigene24393_S2_1

2.79

Up

0.00000126

0.0000204

probable serine/threonine-protein kinase WNK11-like

Unigene6145_S2_3

2.32

Up

1.64E-09

3.76E-08

serine/threonine-protein kinase SRK2B-like

CL8653.Contig4_S2_3

2.21

Up

4.68E-09

0.000000102

serine/threonine-protein kinase HT1-like

Unigene82172_S2_1

1.81

Up

1.26E-14

4.39E-13

LRR receptor-like serine/threonine-protein kinase FLS2-like

CL5751.Contig4_S2_3

1.42

Up

2.22E-27

1.48E-25

serine/threonine-protein kinase GRIK2-like

Unigene98225_S2_3

1.32

Up

0.0000032

0.0000484

probable LRR receptor-like serine/threonine-protein kinase At2g24230-like

CL1564.Contig1_S2_1

1.15

Up

1.15E-08

0.000000243

serine/threonine-protein kinase AtPK2/AtPK19-like

CL3545.Contig5_S2_3

1.01

Up

3.54E-21

1.8E-19

probable serine/threonine-protein kinase At5g41260

CL2492.Contig1_S2_1

-10.17

Down

0.0000845

0.000986827

G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like

Unigene51530_S2_3

-2.71

Down

1.86E-08

0.000000383

probable LRR receptor-like serine/threonine-protein kinase At4g37250-like

Unigene74228_S2_1

-2.58

Down

1.18E-77

2.4E-75

serine/threonine-protein kinase cx32, putative

CL2131.Contig1_S2_1

-2.20

Down

3.39E-51

4.56E-49

G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like

Unigene74499_S2_1

-2.07

Down

0.0000471

0.000577174

probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730

CL102.Contig1_S2_1

-2.05

Down

0.0000183

0.000241927

probable serine/threonine-protein kinase At5g41260

Unigene62396_S2_1

-2.02

Down

4.95E-21

2.49E-19

LRR receptor-like serine/threonine-protein kinase At1g07650-like

Unigene74903_S2_1

-1.89

Down

4.06E-12

1.18E-10

LRR receptor-like serine/threonine-protein kinase At4g37250-like

Unigene5608_S2_1

-1.76

Down

3.3E-23

1.86E-21

LRR receptor-like serine/threonine-protein kinase At1g56130-like isoform 1

Unigene86891_S2_3

-1.33

Down

0.0000185

0.000245014

probable LRR receptor-like serine/threonine-protein kinase At1g53430

 

Unigene13930_S2_1

-1.22

Down

1.29E-13

4.23E-12

LRR receptor-like serine/threonine-protein kinase GSO1