Table 1 The number of contig transcripts generated by the assembly pipeline, and the numbers of transcripts, gene models, gene symbols, and single-exon isoforms after annotation and identification of isoforms in Cynomolgus and African green monkey
From: Transcriptome reconstruction and annotation of cynomolgus and African green monkey
| Â | CM | AG |
|---|---|---|
Contig transcripts | 106,571 | 118,896 |
Contig transcripts per gene model | 4.032 | 3.418 |
Multi exonic contig transcripts | 91,029 | 91,759 |
Single-exon contig transcripts | 15,541 | 27,137 |
Transcripts (finalized transcriptome) | 85,175 | 89,290 |
Gene models | 19,850 | 22,543 |
Unique gene symbols | 16,423 | 17,581 |
Gene models sharing gene symbols with Human Ensembl 73 | 16,889 | 19,125 |
Single-exon isoforms | 3,822 | 5,251 |
Genes with single-exon isoforms | 3,399 | 4,703 |