Table 1 Summary of sequencing data output, statistical analysis of the reads obtained and mapping of the reads onto the cotton ( Gossypium hirsutum ) transcriptome
Total reads1 | Mapped reads2 | % of total | OMM3 | Expressed genes | Yield_Gbases | |
|---|---|---|---|---|---|---|
Sample 3 | 21,726 | 8,56 | ||||
Exon | 85,575,328 | 36,222,891 | 42.33 | 18,153,201 | ||
Not mapped | 85,575,328 | 47,769,762 | 55.82 | |||
Sample 5 | 21,719 | 7,43 | ||||
Exon | 74,271,978 | 32,110,313 | 43.23 | 15,672,772 | ||
Not mapped | 74,271,978 | 40,654,742 | 54.74 | |||
Sample 7 | 21,697 | 7,69 | ||||
Exon | 76,936,854 | 30,018,660 | 39.02 | 14,888,504 | ||
Not mapped | 76,936,854 | 45,549,869 | 59.2 | |||
Sample 8 | 21,732 | 9,07 | ||||
Exon | 90,705,258 | 38,184,759 | 42.1 | 18,824,230 | ||
Not mapped | 90,705,258 | 50,726,083 | 55.92 |