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Table 2 The expression of 88 Gossypium transcription factor (TF) genes in response to cotton boll weevil larvae feeding in flower buds

From: Transcriptome analysis of Gossypium hirsutum flower buds infested by cotton boll weevil (Anthonomus grandis) larvae

Gene family

Contig G. hirsutum

Gene symbol

TAIR code

E-value

Log fold change

Adjusted p-value

Transcription factors

WRKY domain transcription factor

      
 

contig8076

ATWRKY40

AT1g80840

0

4.98

0

 

contig1646

ATWRKY40

AT1g80840

0

4.29

0

 

contig4254

ATWRKY40

AT1g80840

52.76

2.45

6.94715156272822e-13

 

contig313

ATWRKY40

AT1g80840

45.81

2.27

1.59891623026382e-11

 

contig5359

ATWRKY53

AT4g23810

0

5.37

0

 

contig9783

ATWRKY70

AT3g56400

0

4.75

1.14115253194648e-13

 

contig3807

ATWRKY70

AT3g56400

37.27

2.26

5.24201769462223e-11

 

contig3808

ATWRKY70

AT3g56400

34.52

2.24

3.54998511396895e-06

 

contig4599

ATWRKY70

AT3g56400

40.27

2.03

6.30528430834368e-05

 

contig4087

ATWRKY46

AT2g46400

0

4.37

1.76819207423999e-12

 

contig4086

ATWRKY46

AT2g46400

37.03

3.5

0

 

contig9296

ATWRKY46

AT2g46400

30.99

2.88

8.66053260852238e-14

 

contig1954

ATWRKY26

AT5g07100

48.26

2.61

4.46309655899313e-14

 

contig4726

ATWRKY41

AT4g11070

0

4.07

0

 

contig2606

ATWRKY33

AT2g38470

51.1

3.36

0

 

contig2607

ATWRKY33

AT2g38470

53.33

3.14

1.00441679956828e-13

 

contig1952

ATWRKY33

AT2g38470

56.58

2.56

3.0123591681817e-14

 

contig1953

ATWRKY33

AT2g38470

44.67

2.43

2.45606573427175e-11

 

contig16334

ATWRKY72

AT5g15130

44.75

2.75

1.43400565479266e-05

 

contig4409

AtWRKY22

AT4g01250

65.22

2.56

1.56843040084616e-11

AP2/ERE transcription factor

      
 

contig4498

DREB1D

AT5g51990

0

4.88

0

 

contig8299

RRTF1

AT4g34410

0

4.85

1.39364892550935e-13

 

contig5510

ATERF-5

AT5g47230

0

4.7

0

 

contig5512

ATERF-5

AT5g47230

0

4.47

0

 

contig5102

 

AT1g63040

0

3.92

0

 

contig5511

ATERF-5

AT5g47230

0

3.92

0

 

contig18592

CBF4

AT5g51990

0

3.91

8.25514597578304e-13

 

contig16446

ATERF-5

AT5g47230

0

3.72

0

 

contig18443

DREB26

AT1g21910

0

3.7

0

 

contig22401

ATERF-5

AT5g47230

0

3.53

1.03395493612283e-10

 

contig23741

ATERF98

AT3g23230

61.4

3.45

1.35043960387988e-09

 

contig5014

ATERF-5

AT5g47230

44.14

3.17

0

 

contig21166

 

AT1g33760

64

3.11

5.29476229612506e-07

 

contig5559

RAP2.5

AT3g15210

72.29

3.05

0

 

contig13018

ATERF-5

AT5g47230

43.89

2.85

4.47408363363908e-11

 

contig23743

ATERF-9

AT5g44210

90.74

2.78

1.53477793062422e-14

 

contig11060

ABR1

AT5g64750

55.86

2.69

7.42624465574457e-07

 

contig3404

ATERF-9

AT5g44210

47.16

2.63

0

 

contig3403

ATERF-9

AT5g44210

49.51

2.26

2.16279246764181e-11

 

contig11909

 

AT5g61890

44.07

2.26

0

 

contig2076

ATEBP

AT3g16770

48.21

2.23

5.79122872488872e-11

 

contig6750

RAP2.5

AT3g15210

52.26

2.21

1.09859031453532e-10

 

contig21935

TINY2

AT5g11590

67.98

2.19

0

C2H2 zinc-finger

      
 

contig21780

 

AT3g49930

0

3.96

2.21211001647301e-09

 

contig3187

ZAT10

AT1g27730

0

3.64

0

 

contig567

ZAT10

AT1g27730

0

3.63

5.96999381147476e-12

 

contig22821

 

AT3g49930

42.78

3.39

0

 

contig562

STZ

AT1g27730

48.18

3.38

0

 

contig3595

   

3.27

7.24878747340025e-05

 

contig563

STZ

AT1g27730

46.85

3.26

0

 

contig566

STZ

AT1g27730

64.13

3.2

5.89909045523327e-05

 

contig564

STZ

AT1g27730

48.12

2.95

4.46339498962764e-08

 

contig569

STZ

AT1g27730

46.67

2.41

9.59875697444564e-12

 

contig14282

 

AT2g28710

53.08

2.34

2.17861060813777e-07

 

contig7249

 

AT3g46070

49.38

2.29

0

C3H zinc-finger

      
 

contig722

ATSZF2

AT2g40140

0

3.54

0

 

contig729

CZF1

AT2g40140

53.88

2.95

0

 

contig719

CZF1

AT2g40140

62.38

2.79

0

 

contig717

CZF1

AT2g40140

52.39

2.59

2.07852782604537e-13

 

contig720

ATSZF1

AT3g55980

56.62

3.19

1.77734818473086e-08

 

contig728

 

AT3g55980

50

2.38

0.01

MYB domain transcription factor

      
 

contig11515

ATMYB2

AT2g47190

0

4.31

1.53477793062422e-14

 

contig22866

ATMYB73

AT4g37260

0

3.77

0

 

contig19903

ATMYB73

AT4g37260

76.92

3.24

1.10170914685033e-09

 

contig11954

ATMYB78

AT5g49620

47.7

2.98

0

 

contig5383

ATMYB73

AT4g37260

77.88

2.78

0

 

contig11235

ATMYB73

AT4g37260

46.84

2.73

1.09623765025238e-08

GRAS transcription factor

      
 

contig3642

SCL5

AT1g50600

62.53

3.24

0

 

contig18482

ATGRAS2

AT1g07530

58.33

3.24

3.57762043883002e-10

 

contig3507

 

AT3g46600

49.91

2.73

0

 

contig3557

PAT1

AT5g48150

57.06

2.72

0

 

contig4834

PAT1

AT5g48150

63.44

2.04

2.21211001647301e-09

NAC domain transcription factor

      
 

contig2875

ANAC002

AT1g01720

59.86

3.04

0

 

contig718

ANAC002

AT1g01720

66.98

2.82

0

 

contig725

ANAC002

AT1g01720

75.68

2.05

1.37196620183569e-09

 

contig4025

NTL9

AT4g35580

72.48

2.45

3.87976777100843e-08

 

contig4026

CBNAC

AT4g35580

59.24

2.37

4.87321507933394e-12

 

contig14400

ANAC083

AT5g13180

40.79

2.26

1.92653534804078e-07

bHLH, Basic helix-Loop-helix

      
 

contig8902

 

AT4g20970

0

4.79

0

 

contig12411

 

AT2g22750

0

4.15

1.53477793062422e-14

 

contig12410

 

AT2g22760

0

3.53

8.73481683691145e-06

 

contig21436

 

AT3g07340

41.01

3.15

4.49986558503901e-05

 

contig24140

 

AT5g57150

48

2.83

3.38680046143333e-13

 

contig23410

 

AT3g07340

52.34

2.69

8.59443189061066e-06

 

contig24822

BANQUO 1

AT5g39860

67.95

2.65

2.26903319960744e-10

 

contig10541

 

AT1g10120

70.41

2.22

9.34996779453853e-11

 

contig5829

 

AT4g20970

38.85

2.22

0

HSF, Heat-shock transcription factor

      
 

contig1779

ATHSFA2

AT2g26150

50.39

−3.29

0

  1. Genes in bold were tested by qPCR.