From: iMSAT: a novel approach to the development of microsatellite loci using barcoded Illumina libraries
 | A) Phobos | B) MSATCOMMANDER | C) iMSAT | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
repeats | di | tri | tetra | penta | di | tri | tetra | penta | di | tri | tetra | penta |
5 | 4132 | 1612 | 262 | 38 | 5338 | 3496 | 657 | 44 | 772 | 500 | 93 | 18 |
6 | 3737 | 3317 | 683 | 38 | 2090 | 1898 | 218 | 4 | 1718 | 837 | 145 | 8 |
7 | 1751 | 1788 | 229 | 6 | 1243 | 980 | 59 | 2 | 1181 | 717 | 80 | 1 |
8 | 1104 | 958 | 64 | 2 | 762 | 417 | 28 | 1 | 765 | 426 | 29 | 1 |
9 | 616 | 379 | 29 | 1 | 411 | 151 | 10 | 0 | 410 | 178 | 9 | 0 |
10 | 355 | 133 | 12 | 0 | 240 | 46 | 9 | 0 | 228 | 72 | 1 | 0 |
11 | 194 | 43 | 8 | 0 | 134 | 19 | 2 | 0 | 177 | 41 | 2 | 0 |
12 | 105 | 20 | 3 | 0 | 60 | 22 | 0 | 0 | 129 | 17 | 1 | 0 |
13 | 52 | 18 | 0 | 0 | 29 | 4 | 0 | 0 | 92 | 5 | 0 | 0 |
14 | 19 | 5 | 1 | 0 | 13 | 10 | 1 | 0 | 64 | 9 | 0 | 0 |
15 | 15 | 9 | 0 | 0 | 15 | 5 | 6 | 0 | 65 | 5 | 0 | 0 |
16 | 7 | 7 | 8 | 0 | 3 | 3 | 2 | 0 | 46 | 1 | 0 | 0 |
17 | 3 | 4 | 0 | 0 | 1 | 4 | 0 | 0 | 51 | 5 | 0 | 0 |
18 | 1 | 3 | 1 | 0 | 5 | 7 | 0 | 0 | 20 | 0 | 0 | 0 |
19 | 5 | 6 | 0 | 0 | 3 | 16 | 0 | 0 | 39 | 0 | 0 | 0 |
20 | 3 | 17 | 0 | 0 | 1 | 34 | 0 | 0 | 36 | 0 | 0 | 0 |
21+ | 16 | 41 | 0 | 0 | 16 | 7 | 0 | 0 | 124 | 1 | 0 | 0 |
SUM | 12115 | 8360 | 1300 | 85 | 10363 | 7119 | 992 | 51 | 5917 | 2814 | 360 | 28 |
Percent | 55.4 | 38.2 | 5.9 | 0.3 | 55.9 | 38.4 | 5.4 | 0.3 | 64.9 | 30.9 | 3.9 | 0.3 |