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Table 1 STR results from Trioxys pallidus

From: iMSAT: a novel approach to the development of microsatellite loci using barcoded Illumina libraries

  A) Phobos B) MSATCOMMANDER C) iMSAT
repeats di tri tetra penta di tri tetra penta di tri tetra penta
5 4132 1612 262 38 5338 3496 657 44 772 500 93 18
6 3737 3317 683 38 2090 1898 218 4 1718 837 145 8
7 1751 1788 229 6 1243 980 59 2 1181 717 80 1
8 1104 958 64 2 762 417 28 1 765 426 29 1
9 616 379 29 1 411 151 10 0 410 178 9 0
10 355 133 12 0 240 46 9 0 228 72 1 0
11 194 43 8 0 134 19 2 0 177 41 2 0
12 105 20 3 0 60 22 0 0 129 17 1 0
13 52 18 0 0 29 4 0 0 92 5 0 0
14 19 5 1 0 13 10 1 0 64 9 0 0
15 15 9 0 0 15 5 6 0 65 5 0 0
16 7 7 8 0 3 3 2 0 46 1 0 0
17 3 4 0 0 1 4 0 0 51 5 0 0
18 1 3 1 0 5 7 0 0 20 0 0 0
19 5 6 0 0 3 16 0 0 39 0 0 0
20 3 17 0 0 1 34 0 0 36 0 0 0
21+ 16 41 0 0 16 7 0 0 124 1 0 0
SUM 12115 8360 1300 85 10363 7119 992 51 5917 2814 360 28
Percent 55.4 38.2 5.9 0.3 55.9 38.4 5.4 0.3 64.9 30.9 3.9 0.3
  1. Results comparing the total numbers of discovered repeats for each pattern type (di, tri, tetra, or penta) using Phobos, MSATCOMMANDER, and iMSAT. The total numbers of repeats for each pattern are summed, and presented as a percentage of total repeats found using each software program.