Skip to main content

Table 2 Breast cancer Affymetrix U133A microarray datasets

From: Statistical measures of transcriptional diversity capture genomic heterogeneity of cancer

GEO dataset N PAM50 subtype Response group basal-like
   Basal Her2 LumA LumB Normal pCR RD
GSE11121 200 23 18 110 24 25 0 0
GSE20194 91 18 30 16 13 14 7 6
GSE20271 81 19 15 22 9 16 4 15
GSE2034 286 63 35 99 51 38 0 0
GSE22093 96 44 14 16 12 10 18 24
GSE25055 310 120 22 97 46 25 45 73
GSE25065 198 68 15 62 34 19 22 41
GSE7390 198 48 22 93 21 14 0 0
Total 1460 403 171 515 210 161 96 159