Tool | CADD [16] | GEMINI [18] | GWASdb [17] | GWAVA [19] | HaploReg [20] | RegulomeDB [12] | VAS |
---|---|---|---|---|---|---|---|
Client-side data compression | No | (local) | N/A | No | No | No | Yes |
Input variants allowed | ∼100,000 | (Unlimited) | 1 | >10,000 | 10,000 | ∼5,000 | 3,000,000 |
Genomic features/aggregated | 63 | (User defined) | 37 | 14 | 10 | 1,012 | 1,000+ |
features provided | (5 categories) | (6 categories) | (13 categories) | (16 categories) | |||
Data storage and integration | (Not described) | Relational DB | Relational DB | (Not described) | Relational DB | Relational DB | Customized |
Searching flanking regions | No | No | Yes | No | No | No | Yes |
Asynchronous access of results | Yes | (local) | No | No | No | No | Yes |
Linkout to genome browser | No | No | UCSC [24] | Ensembl [34] | No | UCSC | UCSC |