Table 3 Frequency of the filtered SNPs in the tested populations (four yeargroups of farmed Scottish fish, two populations of farmed Norwegian, and a combination of the wild fish)
From: Development and validation of a high density SNP genotyping array for Atlantic salmon (Salmo salar)
Population | Sample size* | Number of SNPs segregating (with MAF ≠ 0) | Number of SNPs segregating (with MAF > 0.05) |
|---|---|---|---|
Overall | 68 | 132,033 | 122,063 |
Farmed Scottish | 39 | 130,062 | 120,157 |
Year-group 1 | 10 | 121,849 | 109,487 |
Year-group 2 | 10 | 117,182 | 105,752 |
Year-group 3 | 9 | 117,185 | 117,184 |
Year-group 4 | 10 | 117,290 | 105,111 |
Farmed Norwegian | 16 | 108,885 | 101,536 |
Population 1 | 8 | 97,631 | 97,631 |
Population 2 | 8 | 74,154 | 74,154 |
Wild | 13 | 119,526 | 110,320 |