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Table 2 w Mel genes potentially inactive in w Au

From: Comparative genome analysis of Wolbachia strain wAu

wMel gene

Function

Matching wAu gene(s)

Difference in wAu

WD0092

DNA processing chain A

WPWAU0139/WPWAU0140

Frameshift

WD0139

Transcriptional activator, tenA family, putative

WPWAU0095

Start codon mutation

WD0196

Hypothetical protein

No match

Truncation

WD0254

Transcriptional regulator, putative

WPWAU0256/WPWAU0257/WPWAU0686/WPWAU0687

Frameshift

WD0274

Conserved hypothetical protein

WPWAU0651

Start codon mutation

WD0284

Conserved hypothetical protein

WPWAU0640/WPWAU0641

Frameshift

WD0288

Prophage LambdaW1, site-specific recombinase, resolvase family

WPWAU0636

Nonsense mutation

WD0294

Ankyrin repeat domain protein

WPWAU0631

Truncation

WD0295

Hypothetical protein

WPWAU0322/WPWAU0323

Frameshift

WD0382

Conserved hypothetical protein

WPWAU0417/WPWAU0418/WPWAU0419

Frameshift

WD0383

Hypothetical protein

WPWAU0420/WPWAU0421

Frameshift

WD0385

Ankyrin repeat domain protein

WPWAU0423/WPWAU0426/WPWAU0427

Mobile element insertion

WD0446

Hypothetical protein

WPWAU0481/

Frameshift

WPWAU0482

WD0462

Hypothetical protein

WPWAU0494/

Frameshift

WPWAU0495

WD0463

ATPase, AAA family

WPWAU0496

Mobile element insertion

WD0472

ATPase, AAA family

WPWAU0507/

Nonsense mutation

WPWAU0508

WD0507

DNA repair protein RadC, truncation

No match

Absent

WD0508

Transcriptional regulator, putative

No match

Absent

WD0509

DNA mismatch repair protein MutL-2

No match

Absent

WD0511

Conserved hypothetical protein

No match

Absent

WD0512

Hypothetical protein

No match

Absent

WD0513

Hypothetical protein

No match

Absent

WD0514

Ankyrin repeat domain protein

No match

Absent

WD0548

Hypothetical protein

WPWAU0565

Frameshift

WD0572

Conserved hypothetical protein

WPWAU0271

Frameshift

WD0582

Regulatory protein RepA, putative

WPWAU0282/

Frameshift

WPWAU0283/

WPWAU0284

WD0591

Conserved hypothetical protein

WPWAU0289

Frameshift

WD0594

Prophage LambdaW4, DNA methylase

WPWAU0291/

Frameshift

WPWAU0292

WD0609

Regulatory protein RepA, putative

WPWAU0669/

Frameshift

WPWAU0670

WD0610

Helicase, SNF2 family

WPWAU0671/

Nonsense mutation

WPWAU0672

WD0619

GlpT/PgpT/UhpT transporter family protein

WPWAU0681

Frameshift

WD0622

Transcriptional regulator, putative

WPWAU0256/

Frameshift

WPWAU0257/

WPWAU0686/

WPWAU0687

WD0630

Hypothetical protein

WPWAU0249

Truncation

WD0631

Hypothetical protein

No match

Absent

WD0632

Hypothetical protein

No match

Absent

WD0636

Prophage LambdaW5, ankyrin repeat domain protein

WPWAU0314/

Frameshift

WPWAU0315

WD0638

Conserved hypothetical protein

WPWAU0311/

Frameshift

WPWAU0312

WD0682

Ribosomal protein S10

WPWAU0607

Nonsense mutation

WD0686

Conserved domain protein

WPWAU0613/

Mobile element insertion

WPWAU0614/

WPWAU0618

WD0696

Hypothetical protein

WPWAU0698

Nonsense mutation

WD0766

Ankyrin repeat domain protein

WPWAU0768

Nonsense mutation

WD1041

Surface protein-related protein

WPWAU1092/

Frameshift

WPWAU1093/

WPWAU1094

WD1111

Hypothetical protein

WPWAU0887/

Frameshift

WPWAU0888

WD1180

Recombination protein RecR

WPWAU1182

Nonsense mutation

WD1187

Hypothetical protein

WPWAU1187

Frameshift

WD1320

Multidrug resistance protein D

WPWAU1315

Frameshift

  1. Truncation refers to shortening of the gene sequence due to partial deletion or genome rearrangement. Small hypothetical genes with multiple matches are not included, as these are likely to be remnants of mobile elements. Genes annotated as truncations in wMel are not included, as these are likely to be inactive in wMel.