Sample ID | Coverage | SNPs | Novel SNPs | Indels1 | Novel indels | Deletions2 | Novel deletions3 |
---|---|---|---|---|---|---|---|
06A010111 | 36.45 | 3,238,983 | 40,780 | 915,917 | 223,334 | 1,939 | 245 |
08P210611 | 36.58 | 3,258,882 | 45,582 | 904,093 | 216,377 | 1,690 | 176 |
24D220611 | 39.68 | 3,274,222 | 46,468 | 912,202 | 219,227 | 1,711 | 202 |
25A220611 | 33.37 | 3,241,675 | 46,364 | 905,503 | 217,648 | 1,676 | 188 |
31P140611 | 36.72 | 3,238,064 | 47,316 | 903,106 | 217,024 | 1,718 | 198 |
32A140611 | 33.56 | 3,268,102 | 42,525 | 907,291 | 217,036 | 1,726 | 192 |
33M140611 | 32.41 | 3,255,966 | 43,745 | 902,853 | 214,684 | 1,743 | 197 |
34S291210 | 37.66 | 3,251,620 | 42,144 | 914,379 | 221,851 | 1,881 | 223 |
35C240511 | 34.42 | 3,241,914 | 39,450 | 910,516 | 219,466 | 1,735 | 184 |
38I220611 | 35.44 | 3,231,738 | 46,475 | 902,232 | 216,872 | 1,681 | 183 |
42S291210 | 31.33 | 3,254,639 | 44,041 | 887,958 | 208,584 | 1,669 | 168 |
48S210611 | 38.17 | 3,302,283 | 43,599 | 914,063 | 218,293 | 1,700 | 178 |
50G301210 | 37.80 | 3,276,506 | 43,416 | 920,203 | 223,146 | 1,930 | 249 |
52C130611 | 32.63 | 3,269,131 | 44,621 | 916,643 | 219,997 | 1,888 | 240 |
57M220611 | 31.60 | 3,213,229 | 42,705 | 891,337 | 212,644 | 1,654 | 182 |
65A220611 | 48.09 | 3,259,571 | 48,211 | 915,187 | 222,548 | 1,676 | 184 |
Non redundant Total | 8,161,894 | 647,131 | 1,729,238 | 526,177 | 3,292 | 494 |