Table 3 Characteristics of the ten A. phagocytophilum genomes investigated in this study
Strain | Host | Geographical origin | Genome size (Mb) | %GC | Number of genes* | Reference |
|---|---|---|---|---|---|---|
HZ | Human (Homo sapiens) | USA | 1.47 | 41.6% | 1411 | [9] |
HZ2 | Human (Homo sapiens) | USA | 1.48 | 41.6% | 1295 | [10] |
HGE1 | Human (Homo sapiens) | USA | 1.48 | 41.6% | 1188 | [10] |
JM | Rodent (Zapus hudsonius) | USA | 1.48 | 41.6% | 1302 | [10] |
Dog2 | Dog (Canis lupus familiaris) | USA | 1.47 | 41.6% | 1304 | [10] |
CRT38 | Tick (Ixodes scapularis) | USA | 1.51 | 41.6% | 1202 | [10] |
CRT35 | Tick (Ixodes scapularis) | USA | 1.45 | 41.6% | 1148 | [10] |
MRK | Horse (Equus caballus) | USA | 1.48 | 41.6% | 1155 | [10] |
10_179 | Cow (Bos taurus) | France | 1,37 | 41.5% | 1041 | this study |
Norway variant2 | Sheep (Ovis aries) | Norway | 1.52 | 41.7% | 1174 | [10] |