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Table 1 Characteristics of raw data and assembly summary

From: Transcriptome of the inflorescence meristems of the biofuel plant Jatropha curcas treated with cytokinin

 

0 HAT

2 HAT

6 HAT

24 HAT

Raw sequencing reads

200,913

201,598

248,674

188,020

Total number of raw read

 

839,205

 

Average length of raw read

 

351 bp

 

High quality reads

182,722

172,682

181,699

166,652

Total number of high quality read

 

703,755

 

Average length of high quality read

 

364 bp

 

Length range of high quality read

 

100 bp - 790 bp

 

Total number of singleton

 

58,920

 

Average length of singleton

 

334 bp

 

Total number of contig

 

23,591

 

Assembled reads (of total number of high quality read)

 

644,835 (91.63%)

 

Average length of contig

 

740 bp

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