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Table 2 Transcriptome annotation summary

From: Transcriptome of the inflorescence meristems of the biofuel plant Jatropha curcas treated with cytokinin

 

Contigs

Singletons

Total unigenes

Number

23,591

58,920

82,511

Predicted CDS

23,576

58,160

81,736

Average CDS length

740 bp

549 bp

604 bp

Maximum CDS length

1,230 bp

564 bp

1230 bp

CDS with known function

18,429

28,356

46,785

CDS with KOG assignment

10,727

12,864

23,591

CDS with GO classification

8,148

11,030

19,178

Unigene sequences mapped to Jatropha genome

18,504

28,848

47,352

  1. CDS: coding sequence; KOG: eukaryotic orthologous groups; GO: gene ontology.