Flexible and scalable genotyping-by-sequencing strategies for population studies

BMC Genomics

Table 1 Enzyme summary statistics

	MlyI	AluI	RsaI	DraI	EcoRV	StuI	HaeIII	HincII
Recognition Motif	GAGTC(N)⁵/	AG/CT	GT/AC	TTT/AAA	GAT/ATC	AGG/CCT	GG/CC	GTY/RAC
				Maize
Reads (2 × 75bp)	11,092,770	68,513,249	13,758,608	2,039,750	1,495,384	785,205	60,419,585	1,011,458
Fraction reads with correct motif	0.389	0.995	0.969	0.957	0.882	0.904	0.996	0.851
				Rice
Reads (2 × 75bp)	2,970,049	73,426,557	7,953,490	7,181,944	498,460	415,512	35,197,321	526,507
Fraction reads with correct motif	0.375	0.995	0.994	0.996	0.946	0.971	0.998	0.890

ISSN: 1471-2164