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Table 8 Unigenes potentially related to panduratin A biosynthesis in phenylpropanoid pathway

From: Transcriptome profiling shows gene regulation patterns in a flavonoid pathway in response to exogenous phenylalanine in Boesenbergia rotunda cell culture

Enzyme name

Abbreviations in the flavanoid pathway (Figure7)

EC number

Enzyme class

Total unigene

Up- regulated

Down-regulated

Phenylpropanoid pathway

cinnamyl-alcohol dehydrogenase

-

1.1.1.195

Oxidoreductase

10

0

6

peroxidase

-

1.11.1.7

Oxidoreductase

90

40

8

ferulate-5-hydroxylase

-

1.14.-.-

Oxidoreductase

4

0

0

p-coumarate 3-hydroxylase

-

1.14.13.-

Oxidoreductase

5

0

2

trans-cinnamate 4-monooxygenase

C4H

1.14.13.11

Oxidoreductase

14

1

3

cinnamoyl-CoA reductase

-

1.2.1.44

Oxidoreductase

18

0

6

coniferyl-aldehyde dehydrogenase

-

1.2.1.68

Oxidoreductase

6

0

3

putative caffeoyl-CoA 3-O-methyltransferase

-

2.1.1.-

Transferase

2

0

0

caffeoyl-CoA O-methyltransferase

-

2.1.1.104

Transferase

2

1

0

caffeic acid 3-O-methyltransferase

-

2.1.1.68

Transferase

14

0

6

shikimate O-hydroxycinnamoyltransferase

-

2.3.1.133

Transferase

43

4

12

sinapoylglucose-choline O-sinapoyltransferase

-

2.3.1.91

Transferase

13

0

0

sinapoylglucose-malate O-sinapoyltransferase

-

2.3.1.92

Transferase

7

0

0

coniferyl-alcohol glucosyltransferase

-

2.4.1.111

Transferase

24

0

0

sinapate 1-glucosyltransferase

-

2.4.1.120

Transferase

29

1

5

beta-glucosidase

-

3.2.1.21

Hydrolase

76

9

17

phenylalanine ammonia-lyase

PAL

4.3.1.24

Lyase

14

2

5

phenylalanine/tyrosine ammonia-lyase

-

4.3.1.25

Lyase

1

0

0

4-coumarate--CoA ligase

4CL

6.2.1.12

Ligase

44

3

15

  1. One unigene may map to more than one enzyme in the pathway. The Table shows all unigenes that are mapped to specific enzymes and gene regulation patterns either up-, down-regulated or both.