Genome sequencing of Sporisorium scitamineum provides insights into the pathogenic mechanisms of sugarcane smut

BMC Genomics

Table 3 Comparative analysis of CAZyme family among various plant pathogen fungi

		CBM	CE	GH	GT	PL	Total	PCW
Biotroph	Ss	181	92	337	253	4	867	68
	Uh	178	83	451	276	5	993	122
	Um	181	103	346	262	3	895	53
	Sr	183	98	339	248	4	872	54
Obligate_biotroph	Mlp	287	141	448	292	7	1,175	124
Obligate_biotroph	Pgt	260	93	415	309	6	1,083	85
Hemibiotroph	Mo	411	177	701	399	9	1,697	125
Hemibiotroph	Fg	373	224	821	439	28	1,885	158
Necrotroph	Vd	351	182	757	361	45	1,696	202
	Fo	669	421	1,587	881	37	3,595	351
	Fv	595	331	1,294	668	35	2,923	238
	Nh	452	334	1,230	527	46	2,589	254

Ss, Sporisorium scitamineum; Uh, Ustilago hordei; Um, Ustilago maydis; Sr, Sporisorium reilianum; Mlp, Melampsora laricis-populina; Pgt, Puccinia graminis f. sp. tritici; Mo, Magnaporthe oryzae; Fg, Fusarium graminearum; Vd, Verticillium dahliae; Fo, Fusarium oxysporum; Fv, Fusarium verticillioides; Nh, Nectria haematococca. CBM, carbohydrate binding module; CE, carbohydrate esterase; GH, glycoside hydrolases; GT, glycosyltransferase; PL, polysaccharide lyase; PCW, plant cell wall degradation related enzyme.

ISSN: 1471-2164