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Table 2 Rank correlations (ρ) and partial rank correlations (ρp) of the examined genomic properties with expression dissimilarities (measured by ExpD1-r or ExpDEuc) of the paralogous adjacent genes

From: Accumulation of CTCF-binding sites drives expression divergence between tandemly duplicated genes in humans

Genomic properties a

ExpD 1-r

ExpD Euc

 

ρ (P-value) b

ρp (P-value) b,c

ρ (P-value) b

ρp (P-value) b,c

d

0.039 (0.164)

-0.011 (0.707)

0.100 (<10-3)

0.021 (0.461)

#CTCF

0.111 (<10-4)

0.103 (<10-3)

0.187 (<10-10)

0.159 (<10-7)

ΔCpGO/E

0.069 (0.015)

0.054 (0.023)

0.102 (<10-3)

0.094 (<10-3)

  1. a "d", intergenic distance; "#CTCF", number of overlapping CTCF-binding sites; "ΔCpGO/E", difference in upstream DNA methylation.
  2. b P values show the probabilities of the observations under the hypothesis of no correlation.
  3. c Spearman's partial correlation coefficient ρp is computed by controlling for the other two genomic properties listed in a