Figure 3

OAR and CAE of adjacency sets from cancer genomes. (A) Distribution of OAR on 74 adjacency sets from TCGA genomes that were classified as stepwise (all (k >2)-breaks) or one-off (all (k = 2)-breaks) in [7]. (B) Correlation between OAR(Ã) and $\hat{k}\left(\tilde{A}\right)$, the estimated proportion of adjacencies originating in (k >2)-breaks, for 50 prostate cancer adjacency sets from [4]. Red dots represent one-off sets and green stepwise are stepwise sets. Dot size indicates number of adjacencies in the set. (C, D) The CAE for the corresponding datasets.