From: SNPs selection using support vector regression and genetic algorithms in GWAS
Group | SNP selection with raw p-values* | # SNPs | Linear** | RBF** | PUK** |
---|---|---|---|---|---|
1 | < 10-9 | 12 | 0.67(0.10) | 0.67(0.10) | 0.67(0.10) |
2 | < 10-8 | 17 | 0.64(0.10) | 0.67(0.10) | 0.67(0.10) |
3 | < 10-7 | 43 | 0.59(0.12) | 0.68(0.09) | 0.70(0.08) |
4 | < 10-6 | 105 | 0.31(0.18) | 0.72(0.07) | 0.71(0.07) |
5 | < 10-5 | 242 | 0.67(0.09) | 0.77(0.08) | 0.78(0.07) |
6 | < 10-4 | 595 | 0.77(0.08) | 0.69(0.09) | 0.79(0.07) |
7 | < 10-3 | 1,397 | 0.78(0.08) | 0.79(0.09) | 0.79(0.08) |
8 | < 10 -2 | 3,357 | 0.80(0.08) | 0.75(0.08) | 0.80(0.08) |