Filter | # SNPs | Linear** | RBF** | PUK** |
---|
Before GA | 220 | 0.36(0.18) | 0.69(0.09) | 0.73(0.09) |
After GA
|
21*
|
0.66(0.13)
|
0.73(0.09)
|
0.75(0.09)
|
- *The selected markers are SNPs 1, 10, 15, 20, 30, 60, 158, 177, 269, 274, 391, 446, 516, 673, 686, 693, 717, 725, 739, 825 and 930.
- ** Mean and standard deviation of the Pearson correlation in 10-fold cross validation.
- The bold line indicates the best model from the second selection for PUK.
- The parameters used by the GA were: population size = 100, number of generations = 500, crossover probability = 0.60, mutation probability = 0.033, seed =1.