Substrate | P5 | P4 | P3 | P2 | P1 | P1' | P2' | P3' | P4' | P5' | PDB ID | ||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Gag polyprotein | CA-p2 | Lys | Ala | Arg | Val | Leu | * | Ala | Glu | Ala | Met | - | 1F7A |
MA-CA | Val | Ser | Gln | Asn | Tyr | * | Pro | Ile | Val | Gln | - | 1KJ4 | |
p1-p6 | Arg | Pro | Gly | Asn | Phe | * | Leu | Gln | Ser | Arg | Pro | 1KJF | |
p2-NC | - | Ala | Thr | Ile | Met | * | Met | Gln | Arg | Gly | - | 1KJ7 | |
Pol polyprotein | RH-IN | Ile | Arg | Lys | Ile | Leu | * | Phe | Leu | Asp | Gly | Ile | 1KJH |
RT-RH | - | Ala | Glu | Thr | Phe | * | Tyr | Val | Asp | Gly | Ala | 1KJG |