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Table 4 Function analysis of 204 down-regulated target genes of UPmiRs and 295 up-regulated target genes of DNmiRs in IPA "Canonical Pathways".

From: Integrated analyses to reconstruct microRNA-mediated regulatory networks in mouse liver using high-throughput profiling

Ingenuity Canonical Pathways

UPmiRs

DNmiRs

 

pvalue

Count

pvalue

Count

Superpathway of Cholesterol Biosynthesis

8.51E-06

5

  

Glycogen Biosynthesis II (from UDP-D-Glucose)

1.10E-03

2

  

Pyrimidine Deoxyribonucleotides De Novo Biosynthesis I

2.09E-02

2

  

Regulation of the Epithelial-Mesenchymal Transition Pathway

4.57E-02

5

7.76E-02

6

Leukocyte Extravasation Signaling

5.50E-02

5

4.17E-03

9

Integrin Signaling

5.50E-02

5

7.59E-05

12

PDGF Signaling

1.98E-01

2

2.51E-04

7

CXCR4 Signaling

2.12E-01

3

3.02E-03

8

PAK Signaling

2.29E-01

3

2.57E-03

6

p53 Signaling

2.64E-01

3

4.27E-03

6

IGF-1 Signaling

2.64E-01

3

2.19E-05

9

p70S6K Signaling

3.54E-01

3

1.20E-02

6

RhoA Signaling

3.54E-01

3

2.95E-03

7

Axonal Guidance Signaling

4.68E-01

5

5.50E-04

17

Molecular Mechanisms of Cancer

5.28E-01

4

2.14E-03

14

NRF2-mediated Oxidative Stress Response

5.42E-01

2

1.86E-03

9

STAT3 Pathway

5.42E-01

1

1.78E-04

7

TGF-P Signaling

5.98E-01

1

7.08E-05

8

Glioma Signaling

6.35E-01

1

8.32E-04

7

Actin Cytoskeleton Signaling

6.76E-03

9

Hepatic Fibrosis/Hepatic Stellate Cell Activation

2.82E-04

11

Protein Kinase A Signaling

9.33E-04

15

ERK/MAPK Signaling

8.91E-03

8

PTEN Signaling

6.03E-04

8

NF-κB Signaling

5.37E-03

8

Regulation of Actin-based Motility by Rho

2.45E-03

6

Cell Cycle: G2/M DNA Damage Checkpoint Regulation

8.13E-03

4

Total number of UPmiR-targets: 29

Total number of DNmiR-targets: 76