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Table 4 Impact of parameter K on MOST/MOST+.

From: MOST+: A de novo motif finding approach combining genomic sequence and heterogeneous genome-wide signatures

Mode K Time(s) Motifs predicted E-value
MOST 7 110.34 2 0.09
  8 111.85 5 4.87e-12
  9 133.06 5 6.35e-21
  10 448.22 5 1.02e-22
  11 2786.11 6 4.78e-20
MOST+ 7 481 5 3.03e-05
  8 510 8 3.95e-13
  9 527 12 3.77e-21
  10 753 14 7.50e-27
  11 3244 6 1.07e-18
  1. The test was run on mouse CTCF dataset (8 Mbp). Columns 3-5: 3) Times: running time under each word width K; 4) Motifs predicted: number of unique motifs found by each schema; and 5) E-value: the lowest e-value of alignments between a major motif found by each schema and motifs in mouse motif database.