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Table 5 Whole-blood cis-eQTL conditional logistic regression results

From: Conditional entropy in variation-adjusted windows detects selection signatures associated with expression quantitative trait loci (eQTLs)

Dataset

Notes

Number of cis-eQTLs

Num. Genes (Regions)

Total GTEx Markers

βH|H ± σH|H

Westra 2012 - Group 1

GO:0006367, GO:0006396, GO:0008544, GO:0042742

11,527

324 (441)

108,372

-0.003 ± 0.003

Westra 2012 - Group 2

GO:0001501, GO:0006869, GO:0006936, GO:0007186, GO:0009653, GO:0016567, GO:0018108, GO:0051056,

63,269

1,265 (1,810)

598,118

0.005 ± 0.001

Westra 2012 - Both

In both Group 1 and in Group 2

1,673

17 (57)

18,447

0.006 ± 0.007

Westra 2012 - TOTAL

RNA extracted from whole blood.

495,268 /923,021

15,742 (14,417)

4,606,410

 
  1. As Table 1 with two additional columns reporting the effect size (β) and standard error (σ) of Adjusted Conditional Haplotype Entropy (H|H) in the hypothesis-testing phase fit to the statistical model in Eq. 1 using the Westra[11] data set.