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Table 3 Variability in the detection of probe sets.

From: Reproducibility of oligonucleotide arrays using small samples

Ā 

Changes in Detection1

Ā 

<3002

300ā€“6002

>6002

Ā 

P10 to A3

A10 to P4

P10 to A3

A10 to P4

P10 to A3

A10 to P4

2.0 Ī¼g

104 (58%)

131 (74%)

51 (28%)

35 (20%)

25 (14%)

1 2 (7%)

0.5 Ī¼g

241 (28%)

128 (74%)

245 (29%)

32 (18%)

365 (43%)

1 4 (8%)

0.1 Ī¼g

346 (28%)

52 (68%)

355 (29%)

15 (19%)

523 (43%)

10 (13%)

  1. 1Changes in Dectection are the average number of Present to Absent and Absent to Present changes per chip when comparing the 10 Ī¼g chip to the reduced RNA sample chip from the same animal. 2Number of changes found among those probe sets that had a signal less than 300, 300 to 600 or greater than 600 (as noted) in the 10 Ī¼g chip. 3Present in 10 Ī¼g chip, absent in reduced RNA sample chip from the same animal. 4Absent in 10 Ī¼g chip, present in reduced RNA sample chip from the same animal.