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Table 3 Relative expression levels obtained by real-time quantitative RT-PCR: Quantitative RT-PCR results in 30 NB cell lines and 9 normal human tissue samples (- : not tested; samples with gene amplification are marked in bold-italics).

From: Combined subtractive cDNA cloning and array CGH: an efficient approach for identification of overexpressed genes in DNA amplicons

Sample

MYCN

TEM8

DDX1

NAG

g10e3

g10d12

g4d5

MEIS1

CHP134

1.79E+00

2.40E-01

5.13E+00

2.13E+00

1.21E-01

1.60E-03

4.08E-03

2.39E+00

CHP901

9.72E-01

1.04E-01

1.71E-02

8.94E-02

9.57E-02

6.24E-03

0.00E+00

4.28E-01

CLB-GA

5.35E-02

3.08E-01

1.10E-01

4.19E-01

2.08E-01

2.69E-02

9.98E-03

5.42E-01

GI-ME-N

9.37E-05

4.53E-01

4.95E-02

2.09E-01

2.71E-01

9.83E-03

0.00E+00

1.27E-01

IMR-32

2.00E+00

1.48E+01

2.94E+00

8.78E+00

2.84E+01

1.81E+01

4.06E+01

3.66E+00

LA-N-1

2.31E+00

4.21E-01

4.64E+00

1.39E-01

1.06E-01

2.84E-03

5.01E-02

3.09E-01

LA-N-5

1.16E+00

3.17E-01

2.15E+00

3.95E-01

1.38E-01

2.56E-02

0.00E+00

5.62E-01

LA-N-6

6.93E-03

1.71E-01

1.09E-01

4.72E-01

8.31E-02

2.94E-02

1.99E-02

1.53E-01

N206

2.79E+00

2.22E-01

1.49E-01

4.91E-01

7.35E-01

1.09E-01

1.21E-01

6.48E-01

NBL-S

1.32E-01

3.67E-01

7.35E-02

3.63E-01

4.96E-01

5.28E-02

7.37E-02

6.96E-01

NGP

5.86E+00

1.14E-01

1.25E-01

1.03E+00

2.91E-01

1.10E-02

0.00E+00

1.85E+00

NLF

3.99E-01

1.21E+00

2.91E+00

3.10E-01

2.20E-02

1.38E-02

0.00E+00

2.38E+00

NMB

1.65E+00

8.94E-01

9.47E-02

2.78E-01

5.41E-01

2.15E-02

3.00E-02

1.23E+00

SJNB-1

5.14E-02

4.14E-01

6.76E-02

1.98E-01

3.83E-01

3.26E-02

5.34E-02

3.16E-01

SJNB-10

2.16E+00

2.56E-01

4.89E-02

2.63E-01

1.16E-01

1.92E-02

9.66E-02

1.94E-01

SJNB-12

4.70E-06

3.11E-01

8.89E-02

2.46E-01

3.96E-01

1.60E-02

5.48E-03

1.14E+00

SJNB-6

1.44E+00

2.19E-01

4.61E-02

4.91E-01

4.12E-01

1.44E+00

4.37E-02

7.26E-01

SJNB-8

2.99E+00

6.71E-01

6.26E+00

3.40E-01

3.57E-01

0.00E+00

5.35E-02

3.47E+00

SK-N-AS

2.39E-03

7.89E-01

6.05E-02

1.76E-01

4.54E-03

7.46E-03

2.39E-01

2.63E+00

SK-N-BE

5.31E-01

7.13E-02

8.12E-02

3.30E-01

1.50E-01

3.60E-02

7.36E-02

1.49E-01

SK-N-FI

9.22E-02

8.44E-01

3.69E-02

1.24E-01

7.22E-03

0.00E+00

3.18E-02

2.73E-01

SK-N-SH

3.90E-03

1.88E+00

7.43E-02

2.36E-01

1.01E-01

1.12E-02

2.23E-02

3.78E-01

SMS-KAN

4.59E+00

3.10E-01

5.93E-02

1.55E-01

1.39E-01

6.69E-03

3.03E-02

2.41E+00

SMS-KCNR

2.96E+00

2.61E-01

1.42E-01

2.34E-01

2.42E-01

1.41E-02

0.00E+00

1.03E+00

STA-NB-10

7.28E-01

1.37E+00

3.05E+00

1.90E-01

1.21E-01

7.30E-03

0.00E+00

2.64E-01

STA-NB-12

5.60E-01

-

7.45E-02

3.49E-01

8.12E-02

0.00E+00

6.47E-02

3.14E-01

STA-NB-3

9.82E-01

2.39E-01

8.67E+00

1.59E+01

4.86E-01

0.00E+00

2.22E-01

7.43E-01

STA-NB-8

2.30E-01

5.44E+00

1.04E+00

6.26E-01

6.99E-02

1.38E-02

9.05E-02

5.20E-01

TR-14

1.61E+00

3.59E-01

4.11E-02

1.63E-01

4.47E-02

0.00E+00

1.75E-02

2.00E-01

UHG-NP

2.09E+00

1.91E-01

6.96E-02

6.09E-01

2.04E-01

4.86E-02

8.88E-02

3.58E-01

Human brain

9.74E-03

2.11E-01

-

-

-

0.00E+00

5.68E-02

1.16E-01

Human fetal brain

-

-

-

-

-

6.95E-02

0.00E+00

2.20E-01

Human heart

1.67E-03

1.78E-01

1.20E-01

5.13E-01

5.18E-02

0.00E+00

3.44E-02

3.75E-01

Human kidney

3.53E-02

1.37E-01

9.06E-02

4.21E-01

2.06E-01

3.27E-02

6.82E-02

6.12E-01

Human liver

1.91E-03

1.26E-01

1.20E-01

3.89E-01

1.73E-01

0.00E+00

7.45E-02

5.94E-01

Human lung

6.61E-03

1.94E+00

6.95E-02

3.82E-01

7.77E-01

2.18E-02

1.05E-01

1.10E+00

Human mammery gland

-

-

-

-

-

4.63E-02

4.10E-02

9.39E-01

Human trachea

1.19E-02

3.81E-01

1.90E-02

2.06E-01

1.11E+00

0.00E+00

6.02E-02

1.09E+00

Human uterus

-

-

-

-

-

4.34E-02

2.55E-01

6.70E+00