Figure 6

Comparison of differentially expressed genes detected by IVT and dIVT protocols (A) Venn diagram comparing genes with P(FC < 1/2 ∪ FC > 2) > 99% shows 59 genes overlapped between the data generated by the 2 protocols. (B) Histogram of the posterior probability P(FC < 1/2 ∪ FC > 2) in dIVT experiments for the 163 genes only called different using the IVT protocol. (C) Histogram of the posterior probability P(FC < 1/2 ∪ FC > 2) in IVT experiments for the 91 genes only called different using the dIVT protocol. (A) and (B) show that more than 60% of the genes detected by only one protocol had posterior probabilities exceeding 90% in the other.