Table 6 N-terminal amino acid frequencies Amino acid frequencies were calculated based on 247 non-plant proteins classified as myristoylated by the NMT model [49], and 587 plant proteins predicted to be myristoylated by HMM266. Bold values indicate relative frequencies for myristoylated plant proteins, italic values for myristoylated animal proteins.
From: Predicting N-terminal myristoylation sites in plant proteins
| Â | Position Number | |||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 |
A | 0.0 | 0.0 | 18.5 | 9.1 | 11.9 | 4.5 | 7.4 | 4.9 | 4.1 | 4.9 | 9.5 | 11.9 | 9.5 | 5.3 | 8.6 | 3.7 | 0.8 | 4.5 | 15.2 | 3.3 | 4.5 | 5.8 |
| Â | 0.0 | 0.0 | 9.1 | 11.1 | 8.7 | 6.5 | 3.6 | 8.2 | 10.6 | 9.1 | 9.6 | 6.7 | 8.2 | 14.4 | 9.1 | 7.7 | 7.5 | 7.5 | 8.2 | 10.3 | 7.4 | 9.4 |
C | 0.0 | 0.0 | 17.7 | 1.2 | 2.5 | 3.3 | 0.8 | 0.4 | 0.4 | 0.8 | 0.8 | 2.1 | 0.8 | 0.0 | 0.8 | 0.4 | 0.4 | 1.2 | 0.0 | 1.2 | 1.2 | 0.0 |
| Â | 0.0 | 0.0 | 18.5 | 27.5 | 14.9 | 3.9 | 5.6 | 0.7 | 1.7 | 0.3 | 4.3 | 2.1 | 1.2 | 0.3 | 1.2 | 0.3 | 3.2 | 0.9 | 0.5 | 0.3 | 1.7 | 0.5 |
D | 0.0 | 0.0 | 0.0 | 1.2 | 0.0 | 0.4 | 0.0 | 3.3 | 6.6 | 9.1 | 2.9 | 4.1 | 0.8 | 9.1 | 7.8 | 4.5 | 3.7 | 11.9 | 6.2 | 4.9 | 4.5 | 4.5 |
| Â | 0.0 | 0.0 | 0.0 | 0.2 | 0.5 | 1.0 | 0.9 | 3.2 | 7.2 | 6.8 | 6.2 | 10.6 | 7.9 | 10.8 | 6.7 | 5.1 | 6.8 | 5.8 | 4.1 | 4.3 | 3.8 | 4.4 |
E | 0.0 | 0.0 | 0.0 | 2.1 | 1.2 | 0.4 | 0.0 | 13.2 | 6.2 | 6.2 | 12.8 | 9.1 | 6.6 | 18.1 | 6.6 | 8.6 | 23.0 | 17.3 | 7.0 | 9.9 | 9.1 | 4.1 |
| Â | 0.0 | 0.0 | 0.2 | 0.5 | 0.5 | 0.5 | 0.5 | 7.0 | 4.1 | 2.9 | 6.7 | 7.2 | 7.9 | 5.3 | 5.5 | 6.2 | 12.0 | 7.5 | 5.6 | 8.2 | 5.5 | 6.5 |
F | 0.0 | 0.0 | 0.0 | 1.2 | 7.4 | 0.8 | 0.8 | 0.8 | 9.1 | 0.0 | 0.4 | 2.1 | 9.9 | 1.6 | 1.6 | 0.4 | 1.2 | 2.1 | 1.6 | 0.0 | 1.6 | 3.7 |
| Â | 0.0 | 0.0 | 1.0 | 5.3 | 13.0 | 0.9 | 0.3 | 2.9 | 6.7 | 1.7 | 0.7 | 4.4 | 6.0 | 3.9 | 4.1 | 2.4 | 2.2 | 3.8 | 0.9 | 1.2 | 1.2 | 2.1 |
G | 0.0 | 100.0 | 12.8 | 6.6 | 2.1 | 2.1 | 2.5 | 2.1 | 1.6 | 8.2 | 23.0 | 13.2 | 3.7 | 14.0 | 3.3 | 5.3 | 2.5 | 1.2 | 1.6 | 5.8 | 7.0 | 8.2 |
| Â | 0.0 | 100.0 | 13.5 | 7.7 | 7.4 | 13.3 | 8.5 | 8.7 | 5.1 | 9.9 | 6.2 | 7.9 | 9.2 | 9.9 | 8.2 | 10.9 | 8.4 | 9.9 | 11.3 | 8.4 | 8.2 | 6.8 |
H | 0.0 | 0.0 | 0.0 | 1.2 | 1.2 | 0.0 | 0.8 | 2.1 | 1.2 | 2.5 | 3.3 | 2.9 | 8.6 | 2.1 | 7.0 | 0.4 | 0.8 | 2.5 | 1.6 | 0.8 | 2.1 | 1.2 |
| Â | 0.0 | 0.0 | 2.1 | 0.2 | 3.8 | 0.0 | 1.7 | 4.4 | 1.7 | 1.4 | 2.4 | 1.4 | 1.2 | 2.2 | 3.8 | 2.4 | 2.4 | 2.7 | 2.1 | 2.1 | 1.7 | 2.9 |
I | 0.0 | 0.0 | 0.4 | 4.9 | 6.2 | 0.4 | 2.5 | 2.9 | 0.0 | 3.3 | 0.8 | 2.1 | 1.6 | 3.3 | 0.4 | 6.2 | 2.1 | 1.2 | 13.2 | 14.8 | 1.2 | 4.1 |
| Â | 0.0 | 0.0 | 3.6 | 2.2 | 2.6 | 0.2 | 1.2 | 3.6 | 2.9 | 1.9 | 2.9 | 4.3 | 3.1 | 0.7 | 1.9 | 3.1 | 2.2 | 2.7 | 1.9 | 5.3 | 2.4 | 2.6 |
K | 0.0 | 0.0 | 5.3 | 11.5 | 9.1 | 0.0 | 44.0 | 8.6 | 16.9 | 14.8 | 9.1 | 7.8 | 5.3 | 1.6 | 14.8 | 9.9 | 11.9 | 9.9 | 3.7 | 6.2 | 8.6 | 11.1 |
| Â | 0.0 | 0.0 | 0.7 | 2.9 | 0.7 | 0.3 | 29.4 | 4.4 | 8.9 | 10.3 | 6.0 | 5.3 | 6.0 | 3.9 | 9.6 | 9.9 | 5.1 | 7.7 | 6.3 | 5.1 | 7.4 | 4.3 |
L | 0.0 | 0.0 | 8.2 | 3.3 | 11.1 | 0.0 | 0.4 | 18.9 | 12.3 | 1.6 | 8.6 | 10.3 | 17.3 | 8.6 | 1.6 | 10.7 | 7.8 | 4.5 | 8.2 | 8.6 | 22.2 | 4.5 |
| Â | 0.0 | 0.0 | 9.1 | 6.3 | 9.9 | 0.7 | 5.1 | 9.6 | 6.0 | 3.2 | 4.3 | 6.7 | 3.4 | 3.1 | 4.8 | 5.3 | 2.9 | 3.4 | 3.1 | 4.4 | 9.7 | 5.6 |
M | 100.0 | 0.0 | 0.8 | 1.2 | 5.3 | 0.0 | 0.8 | 0.8 | 0.8 | 2.1 | 1.6 | 1.2 | 1.6 | 2.5 | 0.0 | 0.0 | 0.8 | 11.9 | 1.6 | 5.8 | 0.0 | 10.3 |
| Â | 100.0 | 0.0 | 0.3 | 0.3 | 2.1 | 0.3 | 0.3 | 0.9 | 0.0 | 0.3 | 0.7 | 1.4 | 1.2 | 0.3 | 0.3 | 0.3 | 0.5 | 3.4 | 0.0 | 0.2 | 0.7 | 4.1 |
N | 0.0 | 0.0 | 14.4 | 2.5 | 4.9 | 0.0 | 2.1 | 2.1 | 2.5 | 1.6 | 3.3 | 0.0 | 3.7 | 0.4 | 7.0 | 4.5 | 6.2 | 2.5 | 1.6 | 5.3 | 4.1 | 9.1 |
| Â | 0.0 | 0.0 | 20.2 | 2.1 | 2.6 | 0.3 | 1.9 | 5.3 | 3.1 | 4.1 | 3.2 | 4.8 | 6.8 | 5.0 | 5.8 | 4.8 | 7.2 | 3.8 | 6.3 | 3.4 | 3.8 | 5.0 |
P | 0.0 | 0.0 | 0.4 | 0.0 | 1.6 | 0.0 | 0.0 | 14.0 | 2.1 | 6.6 | 4.1 | 4.1 | 3.7 | 7.4 | 2.5 | 1.2 | 1.2 | 1.2 | 2.5 | 4.5 | 2.9 | 2.1 |
| Â | 0.0 | 0.0 | 0.2 | 0.3 | 1.2 | 0.3 | 0.7 | 14.7 | 4.1 | 4.6 | 6.0 | 5.3 | 7.2 | 8.0 | 6.0 | 6.3 | 9.9 | 6.0 | 8.7 | 8.0 | 8.7 | 8.2 |
Q | 0.0 | 0.0 | 11.5 | 14.8 | 4.5 | 0.0 | 2.9 | 10.3 | 5.8 | 1.6 | 0.8 | 1.6 | 4.5 | 4.1 | 2.1 | 2.5 | 4.1 | 7.8 | 2.1 | 3.3 | 2.5 | 5.3 |
| Â | 0.0 | 0.0 | 2.9 | 0.7 | 2.9 | 0.2 | 0.9 | 3.1 | 0.7 | 2.6 | 2.4 | 3.8 | 4.1 | 3.2 | 3.8 | 3.6 | 5.1 | 2.9 | 2.2 | 3.6 | 3.4 | 2.9 |
R | 0.0 | 0.0 | 0.0 | 7.8 | 2.1 | 0.0 | 3.3 | 5.3 | 7.8 | 6.6 | 6.2 | 2.5 | 1.6 | 6.6 | 14.4 | 6.6 | 15.6 | 9.5 | 19.3 | 7.8 | 15.6 | 15.6 |
| Â | 0.0 | 0.0 | 1.4 | 4.1 | 1.7 | 5.3 | 13.2 | 2.2 | 9.7 | 11.6 | 8.4 | 5.8 | 6.8 | 6.8 | 8.5 | 7.9 | 6.7 | 8.5 | 10.8 | 9.7 | 10.8 | 6.5 |
S | 0.0 | 0.0 | 9.1 | 9.1 | 3.7 | 77.4 | 5.3 | 8.2 | 16.0 | 17.3 | 5.3 | 7.8 | 6.2 | 7.8 | 6.6 | 11.1 | 5.8 | 4.9 | 3.3 | 5.8 | 5.3 | 2.9 |
| Â | 0.0 | 0.0 | 11.6 | 14.5 | 9.4 | 57.6 | 13.5 | 13.8 | 15.9 | 18.3 | 16.9 | 10.6 | 10.6 | 10.8 | 9.6 | 13.5 | 9.1 | 12.1 | 15.4 | 12.5 | 11.8 | 11.5 |
T | 0.0 | 0.0 | 0.4 | 13.6 | 2.1 | 10.3 | 17.3 | 1.2 | 2.1 | 6.6 | 1.2 | 8.6 | 1.6 | 3.3 | 11.5 | 2.9 | 2.1 | 0.8 | 1.6 | 8.2 | 4.1 | 4.9 |
| Â | 0.0 | 0.0 | 3.1 | 5.6 | 5.3 | 3.1 | 7.2 | 2.4 | 4.6 | 5.8 | 6.8 | 5.3 | 4.6 | 2.7 | 4.1 | 5.0 | 2.2 | 4.6 | 5.1 | 5.0 | 3.8 | 5.1 |
V | 0.0 | 0.0 | 0.4 | 7.8 | 14.4 | 0.4 | 6.2 | 0.4 | 2.9 | 5.8 | 5.3 | 5.3 | 2.9 | 3.3 | 3.3 | 8.6 | 2.9 | 3.3 | 9.1 | 1.6 | 1.6 | 0.8 |
| Â | 0.0 | 0.0 | 2.1 | 7.0 | 8.7 | 5.5 | 4.6 | 4.4 | 5.3 | 4.6 | 4.3 | 5.6 | 2.9 | 7.5 | 5.8 | 3.9 | 4.3 | 4.1 | 5.0 | 4.1 | 6.8 | 7.0 |
W | 0.0 | 0.0 | 0.0 | 0.0 | 8.6 | 0.0 | 0.8 | 0.0 | 0.4 | 0.0 | 0.4 | 1.6 | 9.1 | 0.0 | 0.0 | 9.5 | 3.3 | 0.8 | 0.0 | 0.0 | 1.2 | 0.4 |
| Â | 0.0 | 0.0 | 0.2 | 0.3 | 0.5 | 0.0 | 0.3 | 0.2 | 1.0 | 0.3 | 0.0 | 0.2 | 0.7 | 0.2 | 0.7 | 0.5 | 0.9 | 0.5 | 0.9 | 0.5 | 0.2 | 0.7 |
Y | 0.0 | 0.0 | 0.0 | 0.8 | 0.0 | 0.0 | 2.1 | 0.4 | 1.2 | 0.4 | 0.4 | 1.6 | 0.8 | 0.8 | 0.0 | 2.9 | 3.7 | 0.8 | 0.4 | 2.1 | 0.4 | 1.2 |
| Â | 0.0 | 0.0 | 0.5 | 1.0 | 3.8 | 0.0 | 0.5 | 0.2 | 0.7 | 0.2 | 2.2 | 0.9 | 1.0 | 0.9 | 0.7 | 0.9 | 1.4 | 2.1 | 1.7 | 3.4 | 1.2 | 3.9 |